Configuration and building

Prerequisites

libcurl (libcurl4-gnutls) cmake sqlite3 libsqlite3-dev # promise tracer
gsl-bin libgsl-dbg libgsl-dev xml2 libxml2-dev libmpfr-dev libmpfr-doc libmpfr4 libmpfr4-dbg # packages

set JAVA_PATH or have java in PATH

The easy way

The entire project:

./build.sh

Just the promise tracer module:

./build-tracer.sh

Post instalation:

./install_packages.sh
./sanity_check.sh

Trace vignettes of 25 selected packages:

./run_vignettes.sh

Magic incantations

• Ubuntu 16.04 (kondziu: lucoa/ginger):

  export CPPFLAGS="-g3 -O0 -ggdb"
  export CFLAGS="-g3 -O0 -ggdb"
  export R_KEEP_PKG_SOURCE=yes
  export CXX="g++ -std=c++14"
  
  ./configure --with-blas --with-lapack --without-ICU --without-x \
              --without-tcltk --without-aqua --without-recommended-packages \
              --without-internal-tzcode --with-included-gettext --enable-rdt
  make clean
  make -j8
  
  cd rdt-plugins/promises
  make clean
  cmake .
  make
  cd ../..
  

  Explanation: for some reason, the -std=... flag is not passed

• Ubuntu 16.10 (kondziu):

  export CPPFLAGS="-g3 -O0 -ggdb"
  export CFLAGS="-g3 -O0 -ggdb"
  export R_KEEP_PKG_SOURCE=yes
  
  ./configure --with-blas --with-lapack --without-ICU --without-x \
              --without-tcltk --without-aqua --without-recommended-packages \
              --without-internal-tzcode --with-included-gettext --enable-rdt
  make clean
  make -j8
  
  cd rdt-plugins/promises
  make clean
  cmake .
  make
  cd ../..
  

• Arch Linux (4.10.5-1-ARCH) (licekto+nohajc):

  ./configure --with-blas --with-lapack --without-ICU --without-x \
              --without-tcltk --without-aqua --without-recommended-packages \
              --without-internal-tzcode --with-included-gettext --enable-rdt
  

• OSX 10.12 using Apple clang (fikovnik):

  CFLAGS="-O0 -gdwarf-4 -g3" ./configure --with-blas --with-lapack --without-ICU --without-x --without-tcltk --without-aqua --without-recommended-packages --without-internal-tzcode --enable-rdt  
  make
  

Installing packages

Install prerequisites for packages:

• GSL (GNU Scientific Library) sudo apt install gsl-bin libgsl-dbg libgsl-dev
• XML2 sudo apt install xml2 libxml2-dev
• MPFR sudo apt install libmpfr-dev libmpfr-doc libmpfr4 libmpfr4-dbg

Then run install script:

R_MAX_NUM_DLLS=614 bin/Rscript r-package-anthology.r