write region name for each SNP

RobinM-code · Jan 21, 2022 · 1419504 · 1419504
1 parent 3cc57b0
commit 1419504
Showing 1 changed file with 1 addition and 0 deletions.
diff --git a/aggregate_finemapper_results.py b/aggregate_finemapper_results.py
@@ -52,6 +52,7 @@ def main(args):
             else:
                 raise IOError(err_msg + '.\nTo override this error, please provide the flag --allow-missing-jobs')
         df_sumstats_r = pd.read_table(output_file_r)
+        df_sumstats_r['REGION'] = 'chr%s:%s-%s'%(chr_num, start, end)
 
         #mark distance from center
         middle = (start+end)//2