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Validate alignment errors#15

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smetam wants to merge 6 commits intomasterablab/IsoQuant:masterfrom validate_alignment_errorsablab/IsoQuant:validate_alignment_errorsCopy head branch name to clipboard

+131-38

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Commits on Jul 20, 2020

• pass alignment to check function

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  0c814fe

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Commits on Jul 27, 2020

• add intron misalignment detection

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  53e2125

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• remove MD tag

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• add exon skip misalignment check

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• remove old exon checker

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  28a278a

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• add check for ref and alignment

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