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tractatus committed Apr 11, 2024
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13 changes: 12 additions & 1 deletion README.md
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Quarto shortcode extension to display micrographs in revealjs presentations

## Installing
## Installing quarto

Go to this site to install Quarto CLI, VScode recommend as IDE:
https://quarto.org/docs/get-started/

Also recommend the VScode Quarto extension:
https://quarto.org/docs/tools/vscode.html

## Installing the extension for your project

```bash
quarto add furthlab/micrograph
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{{< micrograph ./img/GFP.jpg DAPI Phalloidin GFP width="255" >}}
```

![](https://github.com/micrograph/example.gif)


## Example

Check our the source code for a minimal example using revealjs for the presentation: [example.qmd](example.qmd).
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3 changes: 2 additions & 1 deletion example.qmd
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{{< micrograph ./resources/MAX_240329_PC3_Rab_Anti_FlagTag_647_E300_I300_Phallodin_594_E100_I500_DAPI_E300_I300_1_MMStack_Pos0.ome.jpg DAPI Phalloidin anti-FLAG width="255" >}}

- **Primary antibody:** 1:1000 overnight
- **Secondary antibody:** 1:1000 for 1h
- **Secondary antibody:** 1:1000 for 1h

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