returned pubish dir option

cellgeni · Nov 21, 2024 · 9a3977e · 9a3977e
1 parent 53b704d
commit 9a3977e
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/nextflow.config b/nextflow.config
@@ -20,7 +20,7 @@ params {
     index_format = "i*i*"
 
     // process params
-    output_dir = "results"
+    publish_dir = "results"
     publish_mode = 'copy'
     container = '/nfs/cellgeni/singularity/images/samtools_v1.18-biobambam2_v2.0.183.sif'
 
@@ -77,5 +77,5 @@ report {
 }
 
 // Unscoped options
-outputDir = params.output_dir
+outputDir = params.publish_dir
 cleanup = true