feat!: Improve fromXML performances that requires async function

chromatography.d.ts

@@ -899,4 +899,4 @@ export function fromNetCDF(netcdf: any): Chromatogram;
  * Creates a new Chromatogram from supported XML formats.
  * @param xml - String containing the XML chromatogram.
  */
-export function fromXML(xml: string): Chromatogram;
+export async function fromXML(xml: string): Chromatogram;

package.json

@@ -45,39 +45,39 @@
   },
   "homepage": "https://github.com/cheminfo/chromatography#readme",
   "devDependencies": {
-    "@babel/plugin-transform-modules-commonjs": "^7.24.8",
-    "@types/jest": "^29.5.12",
-    "@vitest/coverage-v8": "^2.0.5",
+    "@babel/plugin-transform-modules-commonjs": "^7.26.3",
+    "@vitest/coverage-v8": "^2.1.8",
     "cheminfo-build": "^1.2.0",
     "convert-to-jcamp": "^5.4.11",
-    "eslint": "^8.57.0",
-    "eslint-config-cheminfo": "^11.1.1",
+    "eslint": "^9.17.0",
+    "eslint-config-cheminfo": "^13.0.0",
     "esm": "^3.2.25",
     "jest-matcher-deep-close-to": "^3.0.2",
-    "prettier": "^3.3.3",
-    "rollup": "^4.21.1",
-    "spectrum-generator": "^8.0.11",
-    "typescript": "^5.5.4"
+    "prettier": "^3.4.2",
+    "rollup": "^4.28.1",
+    "spectrum-generator": "^8.0.12",
+    "typescript": "^5.7.2",
+    "vitest": "^2.1.8"
   },
   "dependencies": {
     "binary-search": "^1.3.6",
     "is-any-array": "^2.0.1",
-    "isotopic-distribution": "^3.3.1",
-    "jcampconverter": "^9.6.4",
-    "mf-generator": "^3.3.3",
-    "mf-parser": "^3.2.3",
+    "isotopic-distribution": "^3.4.8",
+    "jcampconverter": "^10.0.1",
+    "mf-generator": "^3.3.11",
+    "mf-parser": "^3.3.0",
     "ml-airpls": "^2.0.0",
     "ml-array-max": "^1.2.4",
     "ml-array-mean": "^1.1.6",
     "ml-array-median": "^1.1.6",
     "ml-array-sum": "^1.1.6",
-    "ml-gsd": "^12.1.6",
-    "ml-matrix": "^6.11.1",
+    "ml-gsd": "^12.1.8",
+    "ml-matrix": "^6.12.0",
     "ml-ngmca": "^1.0.0",
     "ml-pca": "^4.1.1",
     "ml-regression-polynomial": "^3.0.1",
-    "ml-spectra-processing": "^14.5.3",
-    "mzdata": "^2.3.1",
+    "ml-spectra-processing": "^14.9.0",
+    "mzdata": "^3.0.0",
     "netcdf-gcms": "^3.0.0",
     "xy-parser": "^5.0.5"
   }

src/from/__tests__/xml.test.js

@@ -6,10 +6,10 @@ import { describe, it, expect } from 'vitest';
 import { fromXML } from '../..';
 
 describe('mzML data files', () => {
-  it('mzData', () => {
+  it('mzData', async () => {
     const path = join(__dirname, '../../../testFiles/mzML/test.mzdata.xml');
     const mzData = readFileSync(path);
-    const chromatogram = fromXML(mzData);
+    const chromatogram = await fromXML(mzData);
     expect(chromatogram).toHaveLength(3029);
   });
 });

src/from/xml.js

@@ -2,6 +2,6 @@ import { parseMZ } from 'mzdata';
 
 import { fromJSON } from '../Chromatogram';
 
-export function fromXML(xml) {
-  return fromJSON(parseMZ(xml));
+export async function fromXML(xml) {
+  return fromJSON(await parseMZ(xml));
 }