Bump version and update CHANGELOG

const-ae · Apr 16, 2024 · a0b0edb · a0b0edb
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diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -10,6 +10,21 @@ and this project adheres to [Semantic Versioning][].
 
 ## [Unreleased]
 
-### Added
+## [0.2.0]
 
--   Basic tool, preprocessing and plotting functions
+Major rewrite of the API. Instead of adding coefficients as custom fields
+to the input `AnnData` object, the API now follows an object-oriented style
+similar to scikit-learn or `SCVI`. This change was motivated by the feedback 
+during the submission to the `scverse` ecosystem.
+([Thanks]((https://github.com/scverse/ecosystem-packages/pull/156#issuecomment-2014676654)) Gregor).
+
+### Changed
+
+- Instead of calling `fit = pylemur.tl.lemur(adata, ...)`, you now create a LEMUR model 
+(`model = pylemur.tl.LEMUR(adata, ...)`) and subsequently call `model.fit()`, `model.align_with_harmony()`, 
+and `model.predict()`.
+
+
+## [0.1.0] - 2024-03-21
+
+-   Initial beta release of `pyLemur`
diff --git a/pyproject.toml b/pyproject.toml
@@ -4,7 +4,7 @@ requires = ["hatchling"]
 
 [project]
 name = "pyLemur"
-version = "0.1.0"
+version = "0.2.0"
 description = "A Python implementation of the LEMUR algorithm for analyzing multi-condition single-cell RNA-seq data."
 readme = "README.md"
 requires-python = ">=3.9"