{astro}[gfbf/2023b] astropy v7.0.0 #22198

casparvl · 2025-01-22T16:53:46Z

(created using eb --new-pr)

Needs:

Export the temporary installdir as env var so that it may be used in EasyConfigs easybuild-easyblocks#3565

github-actions · 2025-01-22T16:54:22Z

Updated software `astropy-7.0.0-gfbf-2023b.eb`

Diff against astropy-5.1.1-intel-2022a.eb

easybuild/easyconfigs/a/astropy/astropy-5.1.1-intel-2022a.eb

diff --git a/easybuild/easyconfigs/a/astropy/astropy-5.1.1-intel-2022a.eb b/easybuild/easyconfigs/a/astropy/astropy-7.0.0-gfbf-2023b.eb
index 187ca13b36..dfd67b9f08 100644
--- a/easybuild/easyconfigs/a/astropy/astropy-5.1.1-intel-2022a.eb
+++ b/easybuild/easyconfigs/a/astropy/astropy-7.0.0-gfbf-2023b.eb
@@ -1,36 +1,58 @@
-easyblock = "PythonBundle"
+easyblock = 'PythonBundle'
 
 name = 'astropy'
-version = '5.1.1'
+version = '7.0.0'
 
 homepage = 'https://www.astropy.org/'
 description = """The Astropy Project is a community effort to develop a common 
 core package for Astronomy in Python and foster an ecosystem of interoperable 
-astronomy packages."""
+astronomy packages.
 
-docurls = 'https://docs.astropy.org'
+The Astropy community is committed to supporting diversity and inclusion."""
 
-toolchain = {'name': 'intel', 'version': '2022a'}
+toolchain = {'name': 'gfbf', 'version': '2023b'}
 
+builddependencies = [
+    ('Cython', '3.0.10'),
+    ('astropy-testing', '7.0.0'),  # Only needed for test step
+]
 dependencies = [
-    ('Python', '3.10.4'),
-    ('SciPy-bundle', '2022.05'),
-    ('PyYAML', '6.0'),
+    ('Python', '3.11.5'),
+    ('SciPy-bundle', '2023.11'),
+    ('PyYAML', '6.0.1'),
+    ('matplotlib', '3.8.2'),
 ]
 
-use_pip = True
 sanity_pip_check = True
+use_pip = True
 
 exts_list = [
-    ('pyerfa', '2.0.0.1', {
+    ('colorlog', '6.9.0', {
+        'checksums': ['bfba54a1b93b94f54e1f4fe48395725a3d92fd2a4af702f6bd70946bdc0c6ac2'],
+    }),
+    ('pyerfa', '2.0.1.5', {
         'modulename': 'erfa',
-        'checksums': ['2fd4637ffe2c1e6ede7482c13f583ba7c73119d78bef90175448ce506a0ede30'],
+        'checksums': ['17d6b24fe4846c65d5e7d8c362dcb08199dc63b30a236aedd73875cc83e1f6c0'],
+    }),
+    ('extension-helpers', '1.2.0', {
+        'modulename': 'extension_helpers',
+        'source_tmpl': 'extension_helpers-%(version)s.tar.gz',
+        'checksums': ['e7d9c8f71804edd7ecd05b5d59a5b504f6e24867970abfc12771242eed76ebcc'],
     }),
-    ('extension-helpers', '1.0.0', {
-        'checksums': ['ca1bfac67c79cf4a7a0c09286ce2a24eec31bf17715818d0726318dd0e5050e6'],
+    ('astropy-iers-data', '0.2025.1.6.0.33.42', {
+        'source_tmpl': 'astropy_iers_data-%(version)s.tar.gz',
+        'checksums': ['0c7e61bcadbafa7db073074eb5f90754449fab65e59abbbc9a65004b5eb4e763'],
     }),
     (name, version, {
-        'checksums': ['ba4bd696af7090fd399b464c704bf27b5633121e461785edc70432606a94bd81'],
+        'checksums': ['e92d7c9fee86eb3df8714e5dd41bbf9f163d343e1a183d95bf6bd09e4313c940'],
+        # Create test installation, since Astropy tests cannot be run on the source / build dir since the import at
+        # https://github.com/astropy/astropy/blob/465a7ffe0cc9c776bc668a6938d029ffb83b68de/astropy/__init__.py#L146
+        # will fail
+        'testinstall': 'True',
+        # Run tests, but skip test_delay_doc_updates, which has a known issues
+        # https://github.com/astropy/astropy/issues/17558
+        # (Probably) fixed in 7.0.X and 7.1 https://github.com/astropy/astropy/pull/17559
+        'runtest': 'cd $EB_TEST_INSTALLDIR && pytest -n %(parallel)s -k "not test_delay_doc_updates" --pyargs astropy'
     }),
 ]

Diff against astropy-5.2.2-gfbf-2022b.eb

easybuild/easyconfigs/a/astropy/astropy-5.2.2-gfbf-2022b.eb

diff --git a/easybuild/easyconfigs/a/astropy/astropy-5.2.2-gfbf-2022b.eb b/easybuild/easyconfigs/a/astropy/astropy-7.0.0-gfbf-2023b.eb
index 16a3315133..dfd67b9f08 100644
--- a/easybuild/easyconfigs/a/astropy/astropy-5.2.2-gfbf-2022b.eb
+++ b/easybuild/easyconfigs/a/astropy/astropy-7.0.0-gfbf-2023b.eb
@@ -1,7 +1,7 @@
-easyblock = "PythonBundle"
+easyblock = 'PythonBundle'
 
 name = 'astropy'
-version = '5.2.2'
+version = '7.0.0'
 
 homepage = 'https://www.astropy.org/'
 description = """The Astropy Project is a community effort to develop a common 
@@ -10,27 +10,49 @@ astronomy packages.
 
 The Astropy community is committed to supporting diversity and inclusion."""
 
-toolchain = {'name': 'gfbf', 'version': '2022b'}
+toolchain = {'name': 'gfbf', 'version': '2023b'}
 
+builddependencies = [
+    ('Cython', '3.0.10'),
+    ('astropy-testing', '7.0.0'),  # Only needed for test step
+]
 dependencies = [
-    ('Python', '3.10.8'),
-    ('SciPy-bundle', '2023.02'),
-    ('PyYAML', '6.0'),
+    ('Python', '3.11.5'),
+    ('SciPy-bundle', '2023.11'),
+    ('PyYAML', '6.0.1'),
+    ('matplotlib', '3.8.2'),
 ]
 
-use_pip = True
 sanity_pip_check = True
+use_pip = True
 
 exts_list = [
-    ('pyerfa', '2.0.0.3', {
+    ('colorlog', '6.9.0', {
+        'checksums': ['bfba54a1b93b94f54e1f4fe48395725a3d92fd2a4af702f6bd70946bdc0c6ac2'],
+    }),
+    ('pyerfa', '2.0.1.5', {
         'modulename': 'erfa',
-        'checksums': ['d77fbbfa58350c194ccb99e5d93aa05d3c2b14d5aad8b662d93c6ad9fff41f39'],
+        'checksums': ['17d6b24fe4846c65d5e7d8c362dcb08199dc63b30a236aedd73875cc83e1f6c0'],
+    }),
+    ('extension-helpers', '1.2.0', {
+        'modulename': 'extension_helpers',
+        'source_tmpl': 'extension_helpers-%(version)s.tar.gz',
+        'checksums': ['e7d9c8f71804edd7ecd05b5d59a5b504f6e24867970abfc12771242eed76ebcc'],
     }),
-    ('extension-helpers', '1.0.0', {
-        'checksums': ['ca1bfac67c79cf4a7a0c09286ce2a24eec31bf17715818d0726318dd0e5050e6'],
+    ('astropy-iers-data', '0.2025.1.6.0.33.42', {
+        'source_tmpl': 'astropy_iers_data-%(version)s.tar.gz',
+        'checksums': ['0c7e61bcadbafa7db073074eb5f90754449fab65e59abbbc9a65004b5eb4e763'],
     }),
     (name, version, {
-        'checksums': ['e6a9e34716bda5945788353c63f0644721ee7e5447d16b1cdcb58c48a96b0d9c'],
+        'checksums': ['e92d7c9fee86eb3df8714e5dd41bbf9f163d343e1a183d95bf6bd09e4313c940'],
+        # Create test installation, since Astropy tests cannot be run on the source / build dir since the import at
+        # https://github.com/astropy/astropy/blob/465a7ffe0cc9c776bc668a6938d029ffb83b68de/astropy/__init__.py#L146
+        # will fail
+        'testinstall': 'True',
+        # Run tests, but skip test_delay_doc_updates, which has a known issues
+        # https://github.com/astropy/astropy/issues/17558
+        # (Probably) fixed in 7.0.X and 7.1 https://github.com/astropy/astropy/pull/17559
+        'runtest': 'cd $EB_TEST_INSTALLDIR && pytest -n %(parallel)s -k "not test_delay_doc_updates" --pyargs astropy'
     }),
 ]

Diff against astropy-4.2.1-intel-2020b.eb

easybuild/easyconfigs/a/astropy/astropy-4.2.1-intel-2020b.eb

diff --git a/easybuild/easyconfigs/a/astropy/astropy-4.2.1-intel-2020b.eb b/easybuild/easyconfigs/a/astropy/astropy-7.0.0-gfbf-2023b.eb
index 878eb8ce9f..dfd67b9f08 100644
--- a/easybuild/easyconfigs/a/astropy/astropy-4.2.1-intel-2020b.eb
+++ b/easybuild/easyconfigs/a/astropy/astropy-7.0.0-gfbf-2023b.eb
@@ -1,40 +1,59 @@
 easyblock = 'PythonBundle'
 
 name = 'astropy'
-version = '4.2.1'
+version = '7.0.0'
 
 homepage = 'https://www.astropy.org/'
-description = """The Astropy Project is a community effort to develop 
-a single core package for Astronomy in Python and foster interoperability 
-between Python astronomy packages."""
+description = """The Astropy Project is a community effort to develop a common 
+core package for Astronomy in Python and foster an ecosystem of interoperable 
+astronomy packages.
 
-toolchain = {'name': 'intel', 'version': '2020b'}
+The Astropy community is committed to supporting diversity and inclusion."""
 
+toolchain = {'name': 'gfbf', 'version': '2023b'}
+
+builddependencies = [
+    ('Cython', '3.0.10'),
+    ('astropy-testing', '7.0.0'),  # Only needed for test step
+]
 dependencies = [
-    ('Python', '3.8.6'),
-    ('SciPy-bundle', '2020.11'),
+    ('Python', '3.11.5'),
+    ('SciPy-bundle', '2023.11'),
+    ('PyYAML', '6.0.1'),
+    ('matplotlib', '3.8.2'),
 ]
 
-use_pip = True
-
 sanity_pip_check = True
+use_pip = True
 
 exts_list = [
-    ('pyerfa', '1.7.3', {
+    ('colorlog', '6.9.0', {
+        'checksums': ['bfba54a1b93b94f54e1f4fe48395725a3d92fd2a4af702f6bd70946bdc0c6ac2'],
+    }),
+    ('pyerfa', '2.0.1.5', {
         'modulename': 'erfa',
-        'checksums': ['6cf3a645d63e0c575a357797903eac5d2c6591d7cdb89217c8c4d39777cf18cb'],
+        'checksums': ['17d6b24fe4846c65d5e7d8c362dcb08199dc63b30a236aedd73875cc83e1f6c0'],
     }),
-    ('extension-helpers', '0.1', {
-        'checksums': ['ac8a6fe91c6d98986a51a9f08ca0c7945f8fd70d95b662ced4040ae5eb973882'],
+    ('extension-helpers', '1.2.0', {
+        'modulename': 'extension_helpers',
+        'source_tmpl': 'extension_helpers-%(version)s.tar.gz',
+        'checksums': ['e7d9c8f71804edd7ecd05b5d59a5b504f6e24867970abfc12771242eed76ebcc'],
+    }),
+    ('astropy-iers-data', '0.2025.1.6.0.33.42', {
+        'source_tmpl': 'astropy_iers_data-%(version)s.tar.gz',
+        'checksums': ['0c7e61bcadbafa7db073074eb5f90754449fab65e59abbbc9a65004b5eb4e763'],
     }),
     (name, version, {
-        'checksums': ['ed483e472241153daec45f4b0c318c2c63d9f47305b78e6e63d32fc388c18427'],
+        'checksums': ['e92d7c9fee86eb3df8714e5dd41bbf9f163d343e1a183d95bf6bd09e4313c940'],
+        # Create test installation, since Astropy tests cannot be run on the source / build dir since the import at
+        # https://github.com/astropy/astropy/blob/465a7ffe0cc9c776bc668a6938d029ffb83b68de/astropy/__init__.py#L146
+        # will fail
+        'testinstall': 'True',
+        # Run tests, but skip test_delay_doc_updates, which has a known issues
+        # https://github.com/astropy/astropy/issues/17558
+        # (Probably) fixed in 7.0.X and 7.1 https://github.com/astropy/astropy/pull/17559
+        'runtest': 'cd $EB_TEST_INSTALLDIR && pytest -n %(parallel)s -k "not test_delay_doc_updates" --pyargs astropy'
     }),
 ]
 
-sanity_check_paths = {
-    'files': [],
-    'dirs': ['lib/python%(pyshortver)s/site-packages/astropy'],
-}
-
 moduleclass = 'astro'

… bundle as build dep for astropy

casparvl · 2025-01-22T20:59:49Z

@boegelbot please test @ jsc-zen3
EB_ARGS="include-easyblocks-from-commit b3989bd9d5e1c81ca155da2f16d314030ce173af"

boegelbot · 2025-01-22T21:10:10Z

@casparvl: Request for testing this PR well received on jsczen3l1.int.jsc-zen3.fz-juelich.de

PR test command 'if [[ develop != 'develop' ]]; then EB_BRANCH=develop ./easybuild_develop.sh 2> /dev/null 1>&2; EB_PREFIX=/home/boegelbot/easybuild/develop source init_env_easybuild_develop.sh; fi; EB_PR=22198 EB_ARGS="include-easyblocks-from-commit b3989bd9d5e1c81ca155da2f16d314030ce173af" EB_CONTAINER= EB_REPO=easybuild-easyconfigs EB_BRANCH=develop /opt/software/slurm/bin/sbatch --job-name test_PR_22198 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen3.sh' executed!

exit code: 0
output:

Submitted batch job 5574

Test results coming soon (I hope)...

- notification for comment with ID 2608256757 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

adding easyconfigs: astropy-7.0.0-gfbf-2023b.eb

219de0c

casparvl added the update label Jan 22, 2025

casparvl mentioned this pull request Jan 22, 2025

Export the temporary installdir as env var so that it may be used in EasyConfigs easybuilders/easybuild-easyblocks#3565

Open

casparvl marked this pull request as draft January 22, 2025 16:54

split off the testing dependencies in a separate bundle, and use that…

6bc234d

… bundle as build dep for astropy

github-actions bot added the new label Jan 22, 2025

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{astro}[gfbf/2023b] astropy v7.0.0 #22198

{astro}[gfbf/2023b] astropy v7.0.0 #22198

casparvl commented Jan 22, 2025 •

edited

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github-actions bot commented Jan 22, 2025 •

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casparvl commented Jan 22, 2025

boegelbot commented Jan 22, 2025

{astro}[gfbf/2023b] astropy v7.0.0 #22198

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{astro}[gfbf/2023b] astropy v7.0.0 #22198

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casparvl commented Jan 22, 2025 • edited Loading

github-actions bot commented Jan 22, 2025 • edited Loading

Updated software astropy-7.0.0-gfbf-2023b.eb

casparvl commented Jan 22, 2025

boegelbot commented Jan 22, 2025

casparvl commented Jan 22, 2025 •

edited

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Updated software `astropy-7.0.0-gfbf-2023b.eb`