Merge pull request #1263 from esm-tools/feat/awiesm_2p6_runscripts

AWIESM 2.x Example Runscripts
esm-tools · Jan 10, 2025 · 11d2371 · 11d2371
2 parents c513be5 + 9cd0317
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diff --git a/runscripts/awiesm/HIST_awiesm-2.1_ollie.yaml → ...ts/awiesm/v2.1/HIST_awiesm-2.1_ollie.yaml b/runscripts/awiesm/HIST_awiesm-2.1_ollie.yaml → ...ts/awiesm/v2.1/HIST_awiesm-2.1_ollie.yaml
diff --git a/...awiesm/PI_ctrl_awiesm-2.1-wiso_ollie.yaml → ...m/v2.1/PI_ctrl_awiesm-2.1-wiso_ollie.yaml b/...awiesm/PI_ctrl_awiesm-2.1-wiso_ollie.yaml → ...m/v2.1/PI_ctrl_awiesm-2.1-wiso_ollie.yaml
diff --git a/...awiesm/PI_ctrl_awiesm-2.1_LR_mistral.yaml → ...m/v2.1/PI_ctrl_awiesm-2.1_LR_mistral.yaml b/...awiesm/PI_ctrl_awiesm-2.1_LR_mistral.yaml → ...m/v2.1/PI_ctrl_awiesm-2.1_LR_mistral.yaml
diff --git a/...s/awiesm/PI_ctrl_awiesm-2.1_LR_ollie.yaml → ...esm/v2.1/PI_ctrl_awiesm-2.1_LR_ollie.yaml b/...s/awiesm/PI_ctrl_awiesm-2.1_LR_ollie.yaml → ...esm/v2.1/PI_ctrl_awiesm-2.1_LR_ollie.yaml
diff --git a/...ts/awiesm/all_awiesm-2.1-recom_ollie.yaml → ...iesm/v2.1/all_awiesm-2.1-recom_ollie.yaml b/...ts/awiesm/all_awiesm-2.1-recom_ollie.yaml → ...iesm/v2.1/all_awiesm-2.1-recom_ollie.yaml
diff --git a/...esm/awiesm-2.1-recom-levante-initial.yaml → ...2.1/awiesm-2.1-recom-levante-initial.yaml b/...esm/awiesm-2.1-recom-levante-initial.yaml → ...2.1/awiesm-2.1-recom-levante-initial.yaml
diff --git a/...cripts/awiesm/awiesm-2.1_basic_ollie.yaml → ...s/awiesm/v2.1/awiesm-2.1_basic_ollie.yaml b/...cripts/awiesm/awiesm-2.1_basic_ollie.yaml → ...s/awiesm/v2.1/awiesm-2.1_basic_ollie.yaml
diff --git a/...esm/awiesm-2.1_icebergs+wiso_levante.yaml → ...2.1/awiesm-2.1_icebergs+wiso_levante.yaml b/...esm/awiesm-2.1_icebergs+wiso_levante.yaml → ...2.1/awiesm-2.1_icebergs+wiso_levante.yaml
diff --git a/...ts/awiesm/awiesm-2.1_icebergs_albedo.yaml → ...iesm/v2.1/awiesm-2.1_icebergs_albedo.yaml b/...ts/awiesm/awiesm-2.1_icebergs_albedo.yaml → ...iesm/v2.1/awiesm-2.1_icebergs_albedo.yaml
diff --git a/...s/awiesm/awiesm-2.1_icebergs_levante.yaml → ...esm/v2.1/awiesm-2.1_icebergs_levante.yaml b/...s/awiesm/awiesm-2.1_icebergs_levante.yaml → ...esm/v2.1/awiesm-2.1_icebergs_levante.yaml
diff --git a/runscripts/awiesm/bootstrap.yaml → runscripts/awiesm/v2.1/bootstrap.yaml b/runscripts/awiesm/bootstrap.yaml → runscripts/awiesm/v2.1/bootstrap.yaml
diff --git a/runscripts/awiesm/icebergs.yaml → runscripts/awiesm/v2.1/icebergs.yaml b/runscripts/awiesm/icebergs.yaml → runscripts/awiesm/v2.1/icebergs.yaml
diff --git a/runscripts/awiesm/pi.yaml → runscripts/awiesm/v2.1/pi.yaml b/runscripts/awiesm/pi.yaml → runscripts/awiesm/v2.1/pi.yaml
diff --git a/runscripts/awiesm/pico.yaml → runscripts/awiesm/v2.1/pico.yaml b/runscripts/awiesm/pico.yaml → runscripts/awiesm/v2.1/pico.yaml
diff --git a/runscripts/awiesm/wiso-pico.yaml → runscripts/awiesm/v2.1/wiso-pico.yaml b/runscripts/awiesm/wiso-pico.yaml → runscripts/awiesm/v2.1/wiso-pico.yaml
diff --git a/runscripts/awiesm/wiso.yaml → runscripts/awiesm/v2.1/wiso.yaml b/runscripts/awiesm/wiso.yaml → runscripts/awiesm/v2.1/wiso.yaml
diff --git a/runscripts/awiesm/v2.6/PI_dynveg_nomomix_withspp_nowiso_noiceberg.yaml b/runscripts/awiesm/v2.6/PI_dynveg_nomomix_withspp_nowiso_noiceberg.yaml
@@ -0,0 +1,78 @@
+general:
+    account: "paleodyn.paleodyn"
+    setup_name: "awiesm"
+    compute_time: "01:55:00"
+    initial_date: "5001-01-01"
+    final_date: "7999-12-31"
+    base_dir: "/albedo/work/projects/p_paleo_compute/stepanek/esm_tools_6_PlioMIP3_production/PlioMIP3_experiments/"
+    nmonth: 0
+    nyear: 1
+    use_venv: False
+    with_wiso: False
+    with_icb: False
+    clean_old_rundirs_except: 2
+    clean_old_rundirs_keep_every: 50
+    version: "2.6"
+    description: >
+      PI_dynveg for PlioMIP3; with dynamic vegetation, without momix, with spp, no stable water isotopes; new model version by Lars; for spinup, stream definitions not yet optimized for production
+
+computer:
+    mail_type: "FAIL"
+    mail_user: "[email protected]"
+
+awiesm:
+    model_dir: "/albedo/work/projects/p_paleo_compute/stepanek/esm_tools_6_PlioMIP3_production/esm_tools/model_codes/awiesm-2.6"
+
+echam:
+    lresume: 1
+    ini_parent_exp_id: "PI_251_wiso_c"
+    #fake_initial_date: "5001-01-01"
+    #ini_parent_date:  "$(( ${fake_initial_date} - ${echam.time_step}seconds ))"
+    ini_parent_date: "50001231"
+    ini_parent_dir: "/albedo/work/projects/p_paleo_compute/stepanek/esm_tools_6_PlioMIP3_production/initial_conditions/PI_251_wiso_c_from_Yuchen/echam/"
+    restart_rate: 1
+    restart_unit: "years"
+    nproca: 24
+    nprocb: 24 
+    nprocar: 0 
+    nprocbr: 0 
+    use_transient_forcing: False
+    namelist_dir: "/albedo/work/projects/p_paleo_compute/stepanek/esm_tools_6_PlioMIP3_production/namelists/namelist_spinup/echam/"
+
+jsbach:
+    namelist_dir: "/albedo/work/projects/p_paleo_compute/stepanek/esm_tools_6_PlioMIP3_production/namelists/namelist_spinup/jsbach/"
+    input_sources:
+        jsbach_1850: "${fesom.mesh_dir}/tarfiles${echam.resolution}/input/jsbach/jsbach_T63CORE2_11tiles_5layers_1850.nc"
+
+fesom:
+    res: "CORE2"
+    nproc: 384
+    mesh_dir: "/albedo/work/projects/p_paleo_compute/stepanek/esm_tools_6_PlioMIP3_production/meshes/mesh_core2/"
+    namelist_dir: "/albedo/work/projects/p_paleo_compute/stepanek/esm_tools_6_PlioMIP3_production/namelists/namelist_spinup/fesom/"
+    lresume: 1
+    ini_parent_exp_id: "PI_251_wiso_c"
+    ini_parent_date: "5000-12-31"
+    ini_parent_dir: "/albedo/work/projects/p_paleo_compute/stepanek/esm_tools_6_PlioMIP3_production/initial_conditions/PI_251_wiso_c_from_Yuchen/fesom/"
+    restart_rate: 1
+    restart_unit: "y"
+    restart_first: 1
+    namelist_changes:
+        namelist.io:
+            diag_list: 
+                ldiag_Ri: remove_from_namelist
+                ldiag_turbflux: remove_from_namelist
+        namelist.tra:
+            tracer_phys: 
+                use_momix: false
+        namelist.oce:
+            oce_dyn: 
+                spp: true
+        namelist.config:
+            paths:
+                ClimateDataPath: "/albedo/work/projects/p_paleo_compute/stepanek/esm_tools_6_PlioMIP3_production/hydrography_fromXiaoXu/"
+
+oasis3mct:
+    lresume: 1
+    ini_parent_exp_id: "PI_251_wiso_c"
+    ini_parent_date: "50001231"
+    ini_parent_dir: "/albedo/work/projects/p_paleo_compute/stepanek/esm_tools_6_PlioMIP3_production/initial_conditions/PI_251_wiso_c_from_Yuchen/oasis3mct/"
diff --git a/setup.cfg b/setup.cfg
@@ -1,5 +1,5 @@
 [bumpversion]
-current_version = 6.43.5
+current_version = 6.44.0
 commit = True
 tag = True
 

diff --git a/setup.py b/setup.py
@@ -114,6 +114,6 @@
     test_suite="tests",
     tests_require=test_requirements,
     url="https://github.com/esm-tools/esm_tools",
-    version="6.43.5",
+    version="6.44.0",
     zip_safe=False,
 )
diff --git a/src/esm_archiving/__init__.py b/src/esm_archiving/__init__.py
@@ -4,7 +4,7 @@
 
 __author__ = """Paul Gierz"""
 __email__ = "[email protected]"
-__version__ = "6.43.5"
+__version__ = "6.44.0"
 
 from .esm_archiving import (archive_mistral, check_tar_lists,
                             delete_original_data, determine_datestamp_location,

diff --git a/src/esm_calendar/__init__.py b/src/esm_calendar/__init__.py
@@ -2,6 +2,6 @@
 
 __author__ = """Dirk Barbi"""
 __email__ = "[email protected]"
-__version__ = "6.43.5"
+__version__ = "6.44.0"
 
 from .esm_calendar import *
diff --git a/src/esm_cleanup/__init__.py b/src/esm_cleanup/__init__.py
@@ -2,4 +2,4 @@
 
 __author__ = """Dirk Barbi"""
 __email__ = "[email protected]"
-__version__ = "6.43.5"
+__version__ = "6.44.0"
diff --git a/src/esm_database/__init__.py b/src/esm_database/__init__.py
@@ -2,4 +2,4 @@
 
 __author__ = """Dirk Barbi"""
 __email__ = "[email protected]"
-__version__ = "6.43.5"
+__version__ = "6.44.0"
diff --git a/src/esm_environment/__init__.py b/src/esm_environment/__init__.py
@@ -2,6 +2,6 @@
 
 __author__ = """Dirk Barbi"""
 __email__ = "[email protected]"
-__version__ = "6.43.5"
+__version__ = "6.44.0"
 
 from .esm_environment import *
diff --git a/src/esm_master/__init__.py b/src/esm_master/__init__.py
@@ -2,7 +2,7 @@
 
 __author__ = """Dirk Barbi"""
 __email__ = "[email protected]"
-__version__ = "6.43.5"
+__version__ = "6.44.0"
 
 
 from . import database
diff --git a/src/esm_motd/__init__.py b/src/esm_motd/__init__.py
@@ -2,6 +2,6 @@
 
 __author__ = """Dirk Barbi"""
 __email__ = "[email protected]"
-__version__ = "6.43.5"
+__version__ = "6.44.0"
 
 from .esm_motd import *
diff --git a/src/esm_parser/__init__.py b/src/esm_parser/__init__.py
@@ -2,7 +2,7 @@
 
 __author__ = """Dirk Barbi"""
 __email__ = "[email protected]"
-__version__ = "6.43.5"
+__version__ = "6.44.0"
 
 
 from .dict_to_yaml import *

diff --git a/src/esm_plugin_manager/__init__.py b/src/esm_plugin_manager/__init__.py
@@ -2,6 +2,6 @@
 
 __author__ = """Dirk Barbi, Paul Gierz, Sebastian Wahl"""
 __email__ = "[email protected]"
-__version__ = "6.43.5"
+__version__ = "6.44.0"
 
 from .esm_plugin_manager import *
diff --git a/src/esm_profile/__init__.py b/src/esm_profile/__init__.py
@@ -2,6 +2,6 @@
 
 __author__ = """Dirk Barbi"""
 __email__ = "[email protected]"
-__version__ = "6.43.5"
+__version__ = "6.44.0"
 
 from .esm_profile import *
diff --git a/src/esm_runscripts/__init__.py b/src/esm_runscripts/__init__.py
@@ -2,7 +2,7 @@
 
 __author__ = """Dirk Barbi"""
 __email__ = "[email protected]"
-__version__ = "6.43.5"
+__version__ = "6.44.0"
 
 from .batch_system import *
 from .chunky_parts import *

diff --git a/src/esm_tests/__init__.py b/src/esm_tests/__init__.py
@@ -2,7 +2,7 @@
 
 __author__ = """Miguel Andres-Martinez"""
 __email__ = "[email protected]"
-__version__ = "6.43.5"
+__version__ = "6.44.0"
 
 from .initialization import *
 from .read_shipped_data import *

diff --git a/src/esm_tools/__init__.py b/src/esm_tools/__init__.py
@@ -23,7 +23,7 @@
 
 __author__ = """Dirk Barbi, Paul Gierz"""
 __email__ = "[email protected]"
-__version__ = "6.43.5"
+__version__ = "6.44.0"
 
 import functools
 import inspect

diff --git a/src/esm_utilities/__init__.py b/src/esm_utilities/__init__.py
@@ -2,6 +2,6 @@
 
 __author__ = """Paul Gierz"""
 __email__ = "[email protected]"
-__version__ = "6.43.5"
+__version__ = "6.44.0"
 
 from .utils import *