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SimpleScript

some little, but useful scripts in life

bfnode.py

node check script with brief output:

check if the node is working normally, including function can get you spare cores, which is usally dealed with job sub controller, but I want a breif output especially when there are dozen nodes.

deljob

if hundreds jobs submitted and one want to delete only part of them, the script allows one delete jobs in python slice fever, like deljob slice_str, of slice string including "3", ":3", "2:", "1:3", "::2"

add_info_to_lmp_dump

add missing info to mdanalysis trajectory object reading from lammps dump file. Mdanalysis is useful, but it's not easy to find functions you want, so I put it here

seq_reorder

reorder numpy array rows by another integers array, can be used at reordering positions of atoms

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