Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

chore(deps): update ubuntu docker tag to v20.10 #147

Open
wants to merge 1 commit into
base: dev
Choose a base branch
from
Open
Show file tree
Hide file tree
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
2 changes: 1 addition & 1 deletion docker/toolkit-bwa-samtools/Dockerfile
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
FROM quay.io/biocontainers/bwa:0.7.17--h5bf99c6_8 AS bwa

FROM ubuntu:20.04
FROM ubuntu:20.10
ENV SAMTOOLS=samtools-1.12
RUN apt update && apt install -y bc libgomp1 libgetopt-complete-perl wget autoconf automake make gcc perl zlib1g-dev libbz2-dev liblzma-dev libcurl4-gnutls-dev libssl-dev libncurses5-dev
RUN wget -qO- https://github.com/samtools/samtools/releases/download/1.12/samtools-1.12.tar.bz2 | tar jxvf - &&\
Expand Down
2 changes: 1 addition & 1 deletion docker/toolkit-bwa2-samtools/Dockerfile
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
FROM quay.io/biocontainers/bwa-mem2:2.2.1--hd03093a_2 AS bwa-mem2

FROM ubuntu:20.04
FROM ubuntu:20.10
ENV SAMTOOLS=samtools-1.12
RUN apt update && apt install -y bc libgomp1 libgetopt-complete-perl wget autoconf automake make gcc perl zlib1g-dev libbz2-dev liblzma-dev libcurl4-gnutls-dev libssl-dev libncurses5-dev
RUN wget -qO- https://github.com/samtools/samtools/releases/download/1.12/samtools-1.12.tar.bz2 | tar jxvf - &&\
Expand Down
2 changes: 1 addition & 1 deletion docker/toolkit-ubuntu/Dockerfile
Original file line number Diff line number Diff line change
@@ -1 +1 @@
FROM ubuntu:20.04
FROM ubuntu:20.10