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Add Illumina manta using docker image from genieusgeonomics
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# Looks like a solid build from a reputable organization | ||
docker: genieusgenomics/manta | ||
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# change this to a URL to describe your container, or to get help | ||
url: https://github.com/Illumina/manta | ||
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# change this to your GitHub alias (or another contact or name) | ||
maintainer: 'jterstriep' | ||
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# A description to describe your container | ||
description: Manta calls structural variants (SVs) and indels from mapped paired-end sequencing reads. It is optimized for analysis of germline variation in small sets of individuals and somatic variation in tumor/normal sample pairs. Manta discovers, assembles and scores large-scale SVs, medium-sized indels and large insertions within a single efficient workflow. | ||
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latest: | ||
1.6.0: sha256:d4fddb84ede35edab0a566f9be1264f95e9330448064f4850c41dc1eeadaa59b | ||
tags: | ||
1.6.0: sha256:d4fddb84ede35edab0a566f9be1264f95e9330448064f4850c41dc1eeadaa59b | ||
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# Put custom aliases here | ||
aliases: | ||
configManta.py: /opt/manta/bin/configManta.py | ||
runMantaWorkflowDemo.py: /opt/manta/bin/runMantaWorkflowDemo.py | ||
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