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Add Illumina manta using docker image from genieusgeonomics
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jterstriep committed Dec 20, 2024
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22 changes: 22 additions & 0 deletions manta/container.yaml
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# Looks like a solid build from a reputable organization
docker: genieusgenomics/manta

# change this to a URL to describe your container, or to get help
url: https://github.com/Illumina/manta

# change this to your GitHub alias (or another contact or name)
maintainer: 'jterstriep'

# A description to describe your container
description: Manta calls structural variants (SVs) and indels from mapped paired-end sequencing reads. It is optimized for analysis of germline variation in small sets of individuals and somatic variation in tumor/normal sample pairs. Manta discovers, assembles and scores large-scale SVs, medium-sized indels and large insertions within a single efficient workflow.

latest:
1.6.0: sha256:d4fddb84ede35edab0a566f9be1264f95e9330448064f4850c41dc1eeadaa59b
tags:
1.6.0: sha256:d4fddb84ede35edab0a566f9be1264f95e9330448064f4850c41dc1eeadaa59b

# Put custom aliases here
aliases:
configManta.py: /opt/manta/bin/configManta.py
runMantaWorkflowDemo.py: /opt/manta/bin/runMantaWorkflowDemo.py

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