export: Add `--warning`, update schema #3194

Job	Run time
mypy	51s
check-docs	38s
pathogen-repo-ci (dengue)	2m 55s
pathogen-repo-ci-v0 (avian-flu)	54s
pathogen-repo-ci (lassa)	7m 28s
pathogen-repo-ci-v0 (ebola)	53s
pyright	10s
pathogen-repo-ci (measles)	1m 31s
pathogen-repo-ci-v0 (mumps)	1m 3s
test (python=3.9 biopython=1.80)	13m 14s
pathogen-repo-ci (mpox)	1m 26s
pathogen-repo-ci-v0 (ncov)	59s
test (python=3.9 biopython=1.82)	13m 31s
pathogen-repo-ci (oropouche)	1m 19s
pathogen-repo-ci-v0 (rsv)	8m 44s
test (python=3.9 biopython=latest)	13m 29s
pathogen-repo-ci (rabies)	2m 26s
pathogen-repo-ci-v0 (seasonal-flu)	1m 9s
test (python=3.10 biopython=1.80)	13m 30s
pathogen-repo-ci (seasonal-cov)	1m 25s
pathogen-repo-ci-v0 (tb)	1m 14s
test (python=3.10 biopython=1.82)	13m 31s
pathogen-repo-ci (wnv)	1m 4s
test (python=3.10 biopython=latest)	13m 15s
pathogen-repo-ci (yellow-fever)	4m 20s
test (python=3.11 biopython=1.80)	13m 29s
pathogen-repo-ci (zika)	1m 11s
test (python=3.11 biopython=1.82)	13m 32s
test (python=3.11 biopython=latest)	13m 26s
test (python=3.12 biopython=1.82)	13m 30s
test (python=3.12 biopython=latest)	13m 31s
build-docs / build	2m 20s
codecov	0s
release	0s
rebuild-docker-image	0s
	3h 11m 58s

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