fix: merge dev (#485)

* feat(finemapping): ingest finngen r10 finemapping w/ airflow (#435) * feat: ingest finngen r10 finemapping w/ airflow * fix: addressed comments from PR #394 * fix: address comments from PR * Update config/step/ot_finngen_finemapping_ingestion.yaml Co-authored-by: Irene López <[email protected]> * Update config/step/ot_finngen_finemapping_ingestion.yaml Co-authored-by: Irene López <[email protected]> * chore: remove unnecessary config --------- Co-authored-by: Yakov <[email protected]> Co-authored-by: David Ochoa <[email protected]> Co-authored-by: Irene López <[email protected]> Co-authored-by: David Ochoa <[email protected]> * docs: susie inf method reloacated with the rest of the methods * ci(release): add action to open pr that triggers release weekly (#474) * chore: add action to open pr that triggers release weekly * fix: make yamllint interpret on keyword as string * fix: adapt time to gmt * chore: update to run at 4pm * fix: update github token variable (#476) * ci: exclude changelog.md from precommit (#479) --------- Co-authored-by: Yakov <[email protected]> Co-authored-by: David Ochoa <[email protected]> Co-authored-by: Irene López <[email protected]> Co-authored-by: David Ochoa <[email protected]>
opentargets · Feb 12, 2024 · 7183180 · 7183180
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commit 7183180
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diff --git a/.github/workflows/pr_release_trigger.yaml b/.github/workflows/pr_release_trigger.yaml
@@ -0,0 +1,22 @@
+name: PR to trigger release
+
+"on":
+  schedule:
+    - cron: "15 16 * * 4"
+
+jobs:
+  pull-request:
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v3
+      - name: pull-request
+        uses: diillson/[email protected]
+        with:
+          source_branch: "dev"
+          destination_branch: "main"
+          pr_title: "chore: trigger release process"
+          pr_body: ":warning: *This PR requires a MERGE or REBASE COMMIT (Don't squash!)*"
+          pr_label: "auto-pr"
+          pr_draft: false
+          pr_allow_empty: true
+          github_token: ${{ secrets.GITHUB_TOKEN }}
diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
@@ -13,6 +13,7 @@ repos:
     hooks:
       - id: trailing-whitespace
       - id: end-of-file-fixer
+        exclude: "CHANGELOG.md"
       - id: debug-statements
       - id: check-merge-conflict
       - id: check-case-conflict
@@ -49,6 +50,7 @@ repos:
     rev: "v4.0.0-alpha.8"
     hooks:
       - id: prettier
+        exclude: "CHANGELOG.md"
 
   - repo: https://github.com/alessandrojcm/commitlint-pre-commit-hook
     rev: v9.11.0

diff --git a/docs/python_api/method/susie_inf.md → docs/python_api/methods/susie_inf.md b/docs/python_api/method/susie_inf.md → docs/python_api/methods/susie_inf.md
@@ -1,7 +1,9 @@
 ---
-title: SuSiE-inf - Fine-mapping with infinitesimal effects v1.1
+title: SuSiE-inf
 ---
 
+# SuSiE-inf - Fine-mapping with infinitesimal effects v1.1
+
 This is an implementation of the SuSiE-inf method found here:
 https://github.com/FinucaneLab/fine-mapping-inf
 https://www.nature.com/articles/s41588-023-01597-3