chore: trigger release process #961
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Dec 19, 2024
github-actions
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…ally refactor: derive the _schema automatically
* feat(study_index): add `StudyIndex.VALID_TYPES` enum * test: mock data have more stringent ID definition + other improvements * refactor: set ID specification in fixtures with expression to avoid changing nullability status * refactor: set ID specification in fixtures with expression to avoid changing nullability status * chore: fix issues
#957) * fix: repair SusieFinemapperStep to work with new SL schema and fix locus missing the lead variantID * fix: changing schema --------- Co-authored-by: Szymon Szyszkowski <[email protected]>
* fix: `poetry shell` is deprecated * chore: update versionin precommit hook * chore: update versionin precommit hook * chore: migrate toml * chore: update version in dockerfile * chore: pre-commit auto fixes [...] * chore: do not use typing deprecated classes according to ruff * build: update `deptry` * build: update `deptry`
Co-authored-by: project-defiant <[email protected]>
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…dex (#948) * feat: rewrite `is_protein_coding_feature_logic` to take info from the variant index * chore: correct genomic_window definition * test: adapt `TestCommonProteinCodingFeatureLogic` * test: adapt `test_build_feature_matrix` * test: adapt `test_build_feature_matrix` * test: adapt `test_build_feature_matrix`
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