Repositories list

• ReportVision

  Public
  Intelligent Data Workflow Automation

  TypeScript

  •

  Apache License 2.0

  •3•1•35•3•Updated Jan 15, 2025Jan 15, 2025

• cfa-epinow2-pipeline

  Public
  R

  •

  Apache License 2.0

  •3•10•36•3•Updated Jan 15, 2025Jan 15, 2025

• reportstream-sftp-ingestion

  Public
  Go

  •

  Apache License 2.0

  •1•5•0•0•Updated Jan 15, 2025Jan 15, 2025

• pyrenew-hew

  Public
  Models and infrastructure for forecasting COVID-19 and Flu hospitalizations using wastewater data with PyRenew

  Python

  •

  Apache License 2.0

  •2•5•54•10•Updated Jan 15, 2025Jan 15, 2025

• cfa-tnd-ve-widget

  Public
  Widget: Test-negative study design for estimating vaccine efficacy

  Python

  •

  Apache License 2.0

  •0•0•7•1•Updated Jan 15, 2025Jan 15, 2025

• trusted-intermediary

  Public
  Bringing together healthcare providers by reducing the connection burden.

  Groovy

  •

  Apache License 2.0

  •6•11•148•4•Updated Jan 15, 2025Jan 15, 2025

• RecordLinker

  Public
  The RecordLinker is a service that links records from two datasets based on a set of common attributes. The service is designed to be used in a variety of public health contexts, such as linking patient records from different sources or linking records from different public health surveillance systems.

  pythonsqlalchemyfastapi

  Python

  •

  Apache License 2.0

  •1•3•16•3•Updated Jan 15, 2025Jan 15, 2025

• phoenix

  Public
  🔥🐦🔥PHoeNIx: a platform agnostic pipeline for healthcare-associated and antimicrobial resistant pathogens

  Python

  •

  Apache License 2.0

  •19•62•10•1•Updated Jan 15, 2025Jan 15, 2025

• prime-reportstream

  Public
  ReportStream is a public intermediary tool for delivery of data between different parts of the healthcare ecosystem.

  fhirpublic-healthcivic-tech+ 1hl7

  Kotlin

  •

  Creative Commons Zero v1.0 Universal

  •40•76•1.3k•131•Updated Jan 15, 2025Jan 15, 2025

• DynODE

  Public
  CDC/CFA/Predict/Scenarios ODE Modeling Framework

  Python

  •

  Apache License 2.0

  •1•6•40•4•Updated Jan 14, 2025Jan 14, 2025

• dibbs-query-connector

  Public
  A FHIR client allowing public health agencies to query health care organizations directly or via a TEFCA QHIN

  TypeScript

  •

  Creative Commons Zero v1.0 Universal

  •1•4•36•4•Updated Jan 14, 2025Jan 14, 2025

• dibbs-vm

  Public
  HCL

  •

  Creative Commons Zero v1.0 Universal

  •1•0•12•2•Updated Jan 14, 2025Jan 14, 2025

• cfa-ngm-widget

  Public
  Python

  •

  Apache License 2.0

  •1•0•9•6•Updated Jan 14, 2025Jan 14, 2025

• cdc-open-viz

  Public
  CDC OpenViz is a library of React packages for data visualization.

  reactvisualizationdata+ 1visualization-library

  TypeScript

  •

  Apache License 2.0

  •21•36•0•11•Updated Jan 14, 2025Jan 14, 2025

• NEDSS-DataIngestionSandbox

  Public
  Sandbox to test concepts and experiments without impacting the NEDSS-DataIngestion

  Python

  •1•1•0•0•Updated Jan 14, 2025Jan 14, 2025

• eMKF

  Public
  SAS

  •

  Apache License 2.0

  •2•2•0•0•Updated Jan 14, 2025Jan 14, 2025

• prime-simplereport

  Public
  SimpleReport is a fast, free, and easy way for COVID-19 testing facilities to report results to public health departments.

  reactjsterraformgraphql+ 1spring-boot

  Java

  •

  Creative Commons Zero v1.0 Universal

  •55•58•383•19•Updated Jan 14, 2025Jan 14, 2025

• Opioid_SUD_MHI_MedCodes

  Public
  Code to flag ICD-10-CM codes related to opioid involvement, substance use disorder, and mental health issues in structured hospital data

  Python

  •3•6•0•0•Updated Jan 14, 2025Jan 14, 2025

• cfa_azure

  Public
  pythonazureazure-batch+ 2azure-container-registryazure-blob-storage

  Python

  •

  Apache License 2.0

  •3•9•3•0•Updated Jan 14, 2025Jan 14, 2025

• covid19-forecast-hub

  Public
  A repository run by the US CDC to collect forecasts of weekly incident COVID-19 hospital admissions.

  R

  •

  Apache License 2.0

  •12•10•10•3•Updated Jan 14, 2025Jan 14, 2025

• ixa-epi-isolation

  Public
  Rust

  •

  Apache License 2.0

  •1•1•0•4•Updated Jan 14, 2025Jan 14, 2025

• NEDSS-Modernization

  Public
  Java

  •3•18•0•2•Updated Jan 14, 2025Jan 14, 2025

• phdi

  Public
  fhir

  HTML

  •

  Creative Commons Zero v1.0 Universal

  •15•35•218•12•Updated Jan 14, 2025Jan 14, 2025

• cfa-rt-postprocessing

  Public
  Python

  •

  Apache License 2.0

  •1•1•7•2•Updated Jan 14, 2025Jan 14, 2025

• NEDSS-Helm

  Public
  This repository is created for NEDSS Helm charts.

  Smarty

  •

  Apache License 2.0

  •2•2•0•5•Updated Jan 14, 2025Jan 14, 2025

• covidhub-reports

  Public
  Apache License 2.0

  •0•0•0•0•Updated Jan 14, 2025Jan 14, 2025

• stimulant_opioid_algorithm_clinical_notes

  Public
  Jupyter Notebook

  •

  Apache License 2.0

  •1•0•0•0•Updated Jan 14, 2025Jan 14, 2025

• NEDSS-DataReporting

  Public
  Data Near Real Time Reporting micro services for Modernized NBS System

  TSQL

  •

  Apache License 2.0

  •1•0•0•4•Updated Jan 14, 2025Jan 14, 2025

• dibbs-site

  Public
  JavaScript

  •2•1•0•8•Updated Jan 14, 2025Jan 14, 2025

• data-exchange-fhir

  Public
  Enterprise Data Exchange (DEX) is a new cloud-native centralized data ingestion, validation, and observation service scoped for common data types (HL7, FHIR, CDA, XML, CSV) sent to the CDC. It helps public health stakeholders who send data to the CDC while reducing the maintenance efforts, complexity, and duplication of ingestion points to CDC.

  C#

  •

  Apache License 2.0

  •4•11•157•6•Updated Jan 14, 2025Jan 14, 2025