Repositories list

• denovoKemp

  Public
  code and source data for de novo design of Kemp elimination paper

  Jupyter Notebook

  •0•0•0•0•Updated Jan 13, 2025Jan 13, 2025

• htFuncLib-web-server

  Public
  Code for running htFuncLib using the FuncLib web server

  Jupyter Notebook

  •0•0•0•0•Updated Dec 5, 2024Dec 5, 2024

• GGAssembler

  Public
  Create a cost sensitive degenerate codon sequence

  Python

  •

  GNU Affero General Public License v3.0

  •1•6•5•1•Updated Aug 2, 2024Aug 2, 2024

• CUMAb

  Public
  Python

  •5•19•1•1•Updated Jun 5, 2024Jun 5, 2024

• CADENZ

  Public
  Code and data for the CADENZ paper

  Jupyter Notebook

  •1•5•0•0•Updated Sep 4, 2023Sep 4, 2023

• htFuncLib

  Public
  Scala

  •

  GNU Affero General Public License v3.0

  •1•6•0•0•Updated Mar 17, 2023Mar 17, 2023

• pSUFER

  Public
  protein Strain, Unsatisfactoriness, and Frustration findER

  Python

  •3•3•0•0•Updated Jan 3, 2022Jan 3, 2022

• LSO

  Public
  local sequence optimality

  0•1•0•0•Updated Nov 11, 2020Nov 11, 2020

• AbDesign_for_enzymes

  Public
  Scripts and data to run AbDesign as described in Tools for protein science 2021

  Python

  •4•9•0•0•Updated Nov 4, 2020Nov 4, 2020

• membrane_protein_energy_function

  Public
  Python

  •1•1•0•0•Updated Jan 2, 2019Jan 2, 2019