This is the course project of EECS458-Intro to Bioinfomatics.
The project is about 'local alignment' & 'global aligment'.
You may change the configuration by editing the file named 'test_config.txt' in the same .zip file.
The first line has to be either 'g' or 'l', which indicates either Global Alignment or Local Alignment respectively.
The second line has 3 parameters, indicates Matching Score, Mismatching Score and Gap Panelty(Indel), respectively.
The third and forth lines indicate the two sequences you would like to align.