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183 Open 260 Closed
183 Open 260 Closed
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Issues list

RasterModel.parse() should accept also DataTree. models
#847 opened Jan 26, 2025 by LucaMarconato
Cases uncaught from validation for raster data models tiledb-soma
#846 opened Jan 25, 2025 by LucaMarconato
1 task
Merfish data not found on S3 bug 🚨 Something isn't working
#844 opened Jan 24, 2025 by Zethson
@Zethson
2
Incremental reading APIs I/O 💿
#843 opened Jan 24, 2025 by LucaMarconato
Save custom .attrs in SpatialElements to disk
#839 opened Jan 21, 2025 by lucas-diedrich
8
Add dev on NGFF version number created by internal call of ome-zarr-py
#838 opened Jan 20, 2025 by LucaMarconato
Add missing docstrings docs 📜 Documentation-related issues
#836 opened Jan 20, 2025 by LucaMarconato
v0.2.6 broken due to updates in Dask
#835 opened Jan 17, 2025 by adkinsrs
4
Importing ROIs and transformations from QuPath
#834 opened Jan 17, 2025 by JRS92
2
Enhancement: Local SpatialData object with remotely accessed pyramidal OME-ZARR image
#831 opened Jan 15, 2025 by edoumazane
4
Jupyter kernel crashing with sdata.write
#827 opened Jan 14, 2025 by josenimo
1
Problem with indices with left_exclusive join
#824 opened Jan 13, 2025 by LucaMarconato
Unable to save subsetted Xenium sdata to .zarr
#821 opened Jan 7, 2025 by christinedien
1
questions about alignment in Figure 2b
#816 opened Jan 3, 2025 by yuling999666
4
How to open the current Zarr based image data as OME-Zarr
#805 opened Dec 9, 2024 by tischi
3
Elements should be validated before starting to write
#804 opened Dec 9, 2024 by timtreis
1
Why is it necessary to produce invalid OME-Zarr images?
#803 opened Dec 6, 2024 by tischi
4
Option to output GeoArrow-encoded parquet from geopandas element: points ⊙ Points in space performance 🚀
#799 opened Dec 3, 2024 by keller-mark
1
Harmonize artifical dataset creation
#796 opened Nov 27, 2024 by berombau
1
Rename SpatialElements enhancement ✨ New feature or request
#793 opened Nov 22, 2024 by Marius1311
1
idea: point on-disk representation using OME-NGFF
#789 opened Nov 14, 2024 by keller-mark
4
Annotating coordinate systems
#780 opened Nov 13, 2024 by LucaMarconato
1
Recommending a workflow for tiling (deep learning use case)
#774 opened Nov 12, 2024 by berombau
3 tasks
User documentation on how to setup jobs or run large analysis
#768 opened Nov 7, 2024 by berombau
1
User documentation on different methods of benchmarking with SpatialData
#763 opened Nov 6, 2024 by berombau
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