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Merged upstream changes#7

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davereinhart merged 22 commits intomainseattleflu/forecasts-ncov-states:mainfrom merged-upstreamseattleflu/forecasts-ncov-states:merged-upstreamCopy head branch name to clipboardAug 2, 2024

+92-68

Commits

Commits on Apr 19, 2024

• Update viz library

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  joverlee521

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• Merge pull request nextstrain#96 from nextstrain/fix-pango-name-clash

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  joverlee521

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Commits on Apr 22, 2024

• Bump conda-incubator/setup-miniconda from 2 to 3

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  dependabot[bot]

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• Merge pull request nextstrain#84: Bump conda-incubator/setup-miniconda from 2 to 3

  victorlin

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• Bump actions/checkout from 2 to 4

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  dependabot[bot]

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• Merge pull request nextstrain#88: Bump actions/checkout from 2 to 4

  victorlin

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Commits on May 6, 2024

• Reduce clade count threshold

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• Merge pull request nextstrain#98 from nextstrain/reduce-clade-count-threshold

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  joverlee521

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Commits on May 7, 2024

• Reduce location count thresholds

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  trvrb

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Commits on May 8, 2024

• viz: Update threshold numbers

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Commits on May 9, 2024

• Merge pull request nextstrain#99 from nextstrain/location-threshold

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  trvrb

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Commits on Jun 5, 2024

• Switch AWS credentials from a long-lived IAM user to short-lived role sessions

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• Merge branch 'trs/aws-credentials'

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Commits on Jun 7, 2024

• ingest: Add Snakemake rules for case counts

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  joverlee521

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• Refactor update-ncov-case-counts.yaml

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  joverlee521

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• Merge pull request nextstrain#102 from nextstrain/case-counts-workflow

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Commits on Jul 17, 2024

• Add .gitattributes file

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Commits on Jul 18, 2024

• Merge pull request nextstrain#105 from nextstrain/git-attrs

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  genehack

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• Convert config.yaml to LF line endings

  joverlee521

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• config: Add clade definition for 24C

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  joverlee521

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• Merge pull request nextstrain#106 from nextstrain/update-24C

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  joverlee521

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Commits on Aug 1, 2024

• Merge remote-tracking branch 'upstream/main' into merged-upstream

  davereinhart

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