refactor: clean up repo and put source files in "src" dir

seung-lab · Jul 18, 2024 · 10bb428 · 10bb428
1 parent be8b67a
commit 10bb428
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Showing 8 changed files with 27 additions and 2 deletions.
diff --git a/AUTHORS b/AUTHORS
@@ -1,3 +1,4 @@
 Andreas Schwab <[email protected]>
 Max <[email protected]>
+William Silversmith <[email protected]>
 William Silversmith <[email protected]>
diff --git a/ChangeLog b/ChangeLog
@@ -1,6 +1,27 @@
 CHANGES
 =======
 
+* ci: add arm64 and x86\_64 to macos build
+* perf: add return\_inverse to fr.unique
+* perf(unique/array): avoid two operations for return\_index
+* feat: point\_cloud supports 2d images
+
+1.14.2
+------
+
+* install: bump python to 3.8, add cnp.import\_array()
+* ci: re-add macos, remove travis, appveyor
+* ci: use numpy without qualification
+* ci: properly specify numpy 2.0 and use working artifact uploader
+* ci: switch to compiling with numpy 2.0
+* ci: use non-buggy version of cibuildwheel
+* refactor: remove COUNT\_T
+* redesign: remove \_\_version\_\_ attribute
+* perf: reduce memory usage during finaly copy for unique\_via\_sort
+* fix: unique supports large arrays for the counts
+* fix: accurate unique counts for large arrays
+* build: more modernizations
+
 1.14.1
 ------
 

diff --git a/MANIFEST.in b/MANIFEST.in
@@ -0,0 +1,3 @@
+recursive-include src *
+exclude src/fastremap.cpp
+include LICENSE
diff --git a/setup.py b/setup.py
@@ -28,11 +28,11 @@ def __repr__(self):
   ext_modules=[
     setuptools.Extension(
       'fastremap',
-      sources=['fastremap.pyx'],
+      sources=['src/fastremap.pyx'],
       depends=[],
       language='c++',
       language_level=3,
-      include_dirs=[str(NumpyImport())],
+      include_dirs=["src", str(NumpyImport())],
       extra_compile_args=extra_compile_args,
     )
   ],

diff --git a/fastremap.pxd → src/fastremap.pxd b/fastremap.pxd → src/fastremap.pxd
diff --git a/fastremap.pyx → src/fastremap.pyx b/fastremap.pyx → src/fastremap.pyx
diff --git a/ipt.hpp → src/ipt.hpp b/ipt.hpp → src/ipt.hpp
diff --git a/ska_flat_hash_map.hpp → src/ska_flat_hash_map.hpp b/ska_flat_hash_map.hpp → src/ska_flat_hash_map.hpp