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fixed data updates in README
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sigven committed May 9, 2018
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Expand Up @@ -52,16 +52,16 @@ Sigve Nakken, Ghislain Fournous, Daniel Vodák, Lars Birger Aaasheim, Ola Mykleb
### Annotation resources included in PCGR (0.6.2)

* [VEP v92](http://www.ensembl.org/info/docs/tools/vep/index.html) - Variant Effect Predictor release 92 (GENCODE v28/v19 as the gene reference dataset)
* [CIViC](http://civic.genome.wustl.edu) - Clinical interpretations of variants in cancer (April 16th 2018)
* [ClinVar](http://www.ncbi.nlm.nih.gov/clinvar/) - Database of clinically related variants (April 2018)
* [CIViC](http://civic.genome.wustl.edu) - Clinical interpretations of variants in cancer (May 8th 2018)
* [ClinVar](http://www.ncbi.nlm.nih.gov/clinvar/) - Database of clinically related variants (May 2018)
* [DoCM](http://docm.genome.wustl.edu) - Database of curated mutations (v3.2, April 2016)
* [CBMDB](http://www.cancergenomeinterpreter.org/biomarkers) - Cancer Biomarkers database (January 17th 2018)
* [IntOGen catalog of driver mutations](https://www.intogen.org/downloads) - (May 2016)
* [DisGeNET](http://www.disgenet.org) - Database of curated gene-tumor type associations (May 2017)
* [Cancer Hotspots](http://cancerhotspots.org) - Resource for statistically significant mutations in cancer (v2 - 2017)
* [dBNSFP v3.5](https://sites.google.com/site/jpopgen/dbNSFP) - Database of non-synonymous functional predictions (August 2017)
* [TCGA release 10.1](https://portal.gdc.cancer.gov/) - somatic mutations discovered across 33 tumor type cohorts (The Cancer Genome Atlas)
* [UniProt/SwissProt KnowledgeBase 2018_03](http://www.uniprot.org) - Resource on protein sequence and functional information (March 2018)
* [UniProt/SwissProt KnowledgeBase 2018_04](http://www.uniprot.org) - Resource on protein sequence and functional information (April 2018)
* [Pfam v31](http://pfam.xfam.org) - Database of protein families and domains (March 2017)
* [DGIdb](http://dgidb.genome.wustl.edu) - Database of targeted cancer drugs (v3.0, September 2017)
* [TSGene v2.0](http://bioinfo.mc.vanderbilt.edu/TSGene/) - Tumor suppressor/oncogene database (November 2015)
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