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Exclude matplotlib 3.7 due to incompatible scanpy. (#929)
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matplotlib just released v3.7, and unfortunately it introduced an
incompatibility with scanpy:

scverse/scanpy#2411

Excluding v3.7 works around this issue. This workaround can be removed
once scanpy itself excludes v3.7, or if scanpy fixes the root cause.
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thetorpedodog authored Feb 14, 2023
1 parent e0e2842 commit 0bc97e8
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1 change: 1 addition & 0 deletions apis/python/setup.py
Original file line number Diff line number Diff line change
Expand Up @@ -177,6 +177,7 @@ def run(self):
install_requires=[
"anndata",
"attrs>=22.1",
"matplotlib<3.7", # https://github.com/scverse/scanpy/issues/2411
"numpy",
"pandas",
"pyarrow >= 9.0.0",
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