[Backport release-1.15] [python] Add region columns and metadata to SpatialData #3556
Conversation
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
![github-actions[bot]](https://avatars.githubusercontent.com/in/15368?s=60&v=4){kind=small}
* Inline SpatialData scene generation to ExperimentAxisQuery This will make iterating over the code changes faster/easier. * (WIP) Add regions to spatialdata table * Add regions to table * (WIP) Fix tests to not have overlapping obs_id * Update spatialdata test so soma_joinid don't overlap * Test regions are correctly set when exporting to SpatialData * Use SOMA_JOINID constant and fix typo
johnkerl
approved these changes
Jan 10, 2025
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Backport dc118ee from #3537