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PyPI packaging notes
John Kerl edited this page May 22, 2024
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Release instructions are at https://github.com/single-cell-data/TileDB-SOMA/wiki/Branches-and-releases.
Here we list steps to be done manually if for some reason the CI job which publishes to PyPI fails, and wheel artifacts need to be re-run manually.
- If the python-packaging workflow doesn't trigger automatically, click "Run workflow" on that page and select the new tag.
- Wait 30-45 minutes for the python-packaging workflow to complete.
- Open the workflow run page (example) and download the three ZIP files (
sdist.zip
,wheels-macosx.zip
,wheels-manylinux2014.zip
). - Create and cd into a temp directory, and extract all the ZIP files there. You should have a flat directory with one
.tar.gz
and numerous.whl
files (the sdist and wheels, respectively), with the expected version number in the filenames. -
twine check tiledbsoma-*
and check all PASSED. (See also twine docs.) -
twine upload tiledbsoma-*
and provide your PyPI creds or API token. - Look over PyPI releases and sanity test (with the new version number):
docker run -e VERSION=0.5.0a2 --rm -it ubuntu:20.04 bash -ec '
apt-get -qq update && apt-get install -y python3-pip
pip3 install tiledbsoma==${VERSION}
python3 -c "import tiledbsoma; print(tiledbsoma.libtiledbsoma.__file__)"'
See also Debugging wheel-build issues.