Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

[bot] update/containers-2024-11-21 #281

Open
wants to merge 1 commit into
base: main
Choose a base branch
from
Open
Show file tree
Hide file tree
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
44 changes: 44 additions & 0 deletions quay.io/biocontainers/gretl/container.yaml
Original file line number Diff line number Diff line change
@@ -0,0 +1,44 @@
url: https://biocontainers.pro/tools/gretl
maintainer: '@vsoch'
description: singularity registry hpc automated addition for gretl
latest:
0.1.0--h715e4b3_0: sha256:94dbc85bb994f011a7786e87034596120d3ae56efaaeb3cfe8d78ea62609b421
tags:
0.1.0--h715e4b3_0: sha256:94dbc85bb994f011a7786e87034596120d3ae56efaaeb3cfe8d78ea62609b421
docker: quay.io/biocontainers/gretl
aliases:
block.py: /usr/local/bin/block.py
core.py: /usr/local/bin/core.py
gretl: /usr/local/bin/gretl
multi.auto.py: /usr/local/bin/multi.auto.py
multi.correlate.py: /usr/local/bin/multi.correlate.py
multi.heatmap.py: /usr/local/bin/multi.heatmap.py
multi.histogram.py: /usr/local/bin/multi.histogram.py
multi.scatter.py: /usr/local/bin/multi.scatter.py
nwindow.py: /usr/local/bin/nwindow.py
path.py: /usr/local/bin/path.py
ps.py: /usr/local/bin/ps.py
saturation_plotter.py: /usr/local/bin/saturation_plotter.py
stats_path.py: /usr/local/bin/stats_path.py
window.py: /usr/local/bin/window.py
qconvex: /usr/local/bin/qconvex
qdelaunay: /usr/local/bin/qdelaunay
qhalf: /usr/local/bin/qhalf
qhull: /usr/local/bin/qhull
qvoronoi: /usr/local/bin/qvoronoi
rbox: /usr/local/bin/rbox
numpy-config: /usr/local/bin/numpy-config
fonttools: /usr/local/bin/fonttools
pyftmerge: /usr/local/bin/pyftmerge
pyftsubset: /usr/local/bin/pyftsubset
ttx: /usr/local/bin/ttx
brotli: /usr/local/bin/brotli
tjbench: /usr/local/bin/tjbench
opj_compress: /usr/local/bin/opj_compress
opj_decompress: /usr/local/bin/opj_decompress
opj_dump: /usr/local/bin/opj_dump
2to3-3.10: /usr/local/bin/2to3-3.10
idle3.10: /usr/local/bin/idle3.10
pydoc3.10: /usr/local/bin/pydoc3.10
python3.10: /usr/local/bin/python3.10
python3.10-config: /usr/local/bin/python3.10-config
41 changes: 41 additions & 0 deletions quay.io/biocontainers/instanovo/container.yaml
Original file line number Diff line number Diff line change
@@ -0,0 +1,41 @@
url: https://biocontainers.pro/tools/instanovo
maintainer: '@vsoch'
description: singularity registry hpc automated addition for instanovo
latest:
1.0.0--pyhdfd78af_0: sha256:e28eabae0be906b7bdf48335d561023d6ced5c332be9913e3ed0b0b3659f69e4
tags:
1.0.0--pyhdfd78af_0: sha256:e28eabae0be906b7bdf48335d561023d6ced5c332be9913e3ed0b0b3659f69e4
docker: quay.io/biocontainers/instanovo
aliases:
datasets-cli: /usr/local/bin/datasets-cli
dotenv: /usr/local/bin/dotenv
huggingface-cli: /usr/local/bin/huggingface-cli
jiwer: /usr/local/bin/jiwer
neptune: /usr/local/bin/neptune
pygrun: /usr/local/bin/pygrun
x86_64-conda-linux-gnu.cfg: /usr/local/bin/x86_64-conda-linux-gnu.cfg
jsonpointer: /usr/local/bin/jsonpointer
torch_shm_manager: /usr/local/bin/torch_shm_manager
wsdump: /usr/local/bin/wsdump
get_gprof: /usr/local/bin/get_gprof
svm-predict: /usr/local/bin/svm-predict
svm-scale: /usr/local/bin/svm-scale
svm-train: /usr/local/bin/svm-train
gi-compile-repository: /usr/local/bin/gi-compile-repository
gi-decompile-typelib: /usr/local/bin/gi-decompile-typelib
gi-inspect-typelib: /usr/local/bin/gi-inspect-typelib
protoc-25.3.0: /usr/local/bin/protoc-25.3.0
xxh128sum: /usr/local/bin/xxh128sum
xxh32sum: /usr/local/bin/xxh32sum
xxh64sum: /usr/local/bin/xxh64sum
mpg123: /usr/local/bin/mpg123
mpg123-id3dump: /usr/local/bin/mpg123-id3dump
mpg123-strip: /usr/local/bin/mpg123-strip
out123: /usr/local/bin/out123
xxhsum: /usr/local/bin/xxhsum
dumpsexp: /usr/local/bin/dumpsexp
gpg-error: /usr/local/bin/gpg-error
gpgrt-config: /usr/local/bin/gpgrt-config
hmac256: /usr/local/bin/hmac256
mpicalc: /usr/local/bin/mpicalc
yat2m: /usr/local/bin/yat2m
31 changes: 31 additions & 0 deletions quay.io/biocontainers/mzpaf/container.yaml
Original file line number Diff line number Diff line change
@@ -0,0 +1,31 @@
url: https://biocontainers.pro/tools/mzpaf
maintainer: '@vsoch'
description: singularity registry hpc automated addition for mzpaf
latest:
0.2.0a0--pyh7e72e81_0: sha256:60f355b2bfbf21629c582bdce0d16657bc41f80fdba58829f224c13dc1491160
tags:
0.2.0a0--pyh7e72e81_0: sha256:60f355b2bfbf21629c582bdce0d16657bc41f80fdba58829f224c13dc1491160
docker: quay.io/biocontainers/mzpaf
aliases:
idle3.13: /usr/local/bin/idle3.13
pydoc3.13: /usr/local/bin/pydoc3.13
python3.13: /usr/local/bin/python3.13
python3.13-config: /usr/local/bin/python3.13-config
qconvex: /usr/local/bin/qconvex
qdelaunay: /usr/local/bin/qdelaunay
qhalf: /usr/local/bin/qhalf
qhull: /usr/local/bin/qhull
qvoronoi: /usr/local/bin/qvoronoi
rbox: /usr/local/bin/rbox
numpy-config: /usr/local/bin/numpy-config
xslt-config: /usr/local/bin/xslt-config
xsltproc: /usr/local/bin/xsltproc
fonttools: /usr/local/bin/fonttools
pyftmerge: /usr/local/bin/pyftmerge
pyftsubset: /usr/local/bin/pyftsubset
ttx: /usr/local/bin/ttx
brotli: /usr/local/bin/brotli
tjbench: /usr/local/bin/tjbench
opj_compress: /usr/local/bin/opj_compress
opj_decompress: /usr/local/bin/opj_decompress
opj_dump: /usr/local/bin/opj_dump
18 changes: 18 additions & 0 deletions quay.io/biocontainers/search_ncbi/container.yaml
Original file line number Diff line number Diff line change
@@ -0,0 +1,18 @@
url: https://biocontainers.pro/tools/search_ncbi
maintainer: '@vsoch'
description: singularity registry hpc automated addition for search_ncbi
latest:
0.1.1--pyhdfd78af_0: sha256:01e06ac641e0820531485f087dba9d4836e2ed8573832eb5cfd05528292289cf
tags:
0.1.1--pyhdfd78af_0: sha256:01e06ac641e0820531485f087dba9d4836e2ed8573832eb5cfd05528292289cf
docker: quay.io/biocontainers/search_ncbi
aliases:
searchncbi: /usr/local/bin/searchncbi
numpy-config: /usr/local/bin/numpy-config
2to3-3.12: /usr/local/bin/2to3-3.12
idle3.12: /usr/local/bin/idle3.12
pydoc3.12: /usr/local/bin/pydoc3.12
python3.12: /usr/local/bin/python3.12
python3.12-config: /usr/local/bin/python3.12-config
tqdm: /usr/local/bin/tqdm
normalizer: /usr/local/bin/normalizer
10 changes: 10 additions & 0 deletions quay.io/biocontainers/snpick/container.yaml
Original file line number Diff line number Diff line change
@@ -0,0 +1,10 @@
url: https://biocontainers.pro/tools/snpick
maintainer: '@vsoch'
description: singularity registry hpc automated addition for snpick
latest:
1.0.0--h3f2c17f_0: sha256:5759dec7c0b1304d37ab37fcf65af7fb9589d5cf4439774c4755a97f51c604e8
tags:
1.0.0--h3f2c17f_0: sha256:5759dec7c0b1304d37ab37fcf65af7fb9589d5cf4439774c4755a97f51c604e8
docker: quay.io/biocontainers/snpick
aliases:
snpick: /usr/local/bin/snpick