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v1.0.7

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@sokrypton sokrypton released this 19 Sep 15:15
· 276 commits to main since this release
81f1f71
  • refactoring design.py to add design_pssm_semigreedy() protocol, which is a wrapper around design_semigreedy(seq_logits=), and can be used to input/learn PSSM for biased optimization.
  • adding example peptide_binder_design.ipynb targeted for peptide binder hallucination/design.
  • adding finer control over what models are used during optimization.
  • fixing RAM memory leaks, clear_mem() now also does garbage collection
  • fixing integration with TrDesign that got broken in v1.0.6
  • WARNING: custom loss_callback has been refactored to only take (inputs, outputs) as input. inputs dictionary now contains ["params","opt","seq"]