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v0.6.8

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@salvadord salvadord released this 10 Mar 02:25
· 3376 commits to master since this release

Version 0.6.8

  • Keep track of last host after distributing cells of each pop (improves load balance) (issues #41 #196)

  • Added option to run batch on HPC SLURM system (eg. SDSC Comet)

  • Added cvode_atol option to cfg

  • Improved plotShape() to use matplotlib and use colormap to show num syns

  • Batch params can now have an arbitrary number of levels in structure (eg. dict of list of dicts etc)

  • Batch params can now be grouped ('group':True) so values vary together not combinatorally

  • Removed pc.done() at the end of Batch.run() method so can run multiple batches from same script

  • Added skipCfg option to batch

  • Added cfg.saveCellSecs option to reduce save time and file size (secs available via netParams)

  • Added cfg.saveCellConns option to reduce save time and file size

  • Modified code so 'cellModel' tag is optional

  • Added renameCellParamsSec() method to netParams class

  • When importing cell global 'v_init' is stored as param for each section

  • Fixed small bugs when loading saved model

  • Fixed bug when calling internal method _findPrePostCellsCondition()

  • Fixed bug in subcellConn groupedSynMechs

  • Fixed bug in subcellConn trying to add stims+conns to NetStims/VecStims

  • Fixed bug in subcellConn so syns are not placed at loc 0.0 or 1.0 (error if syn uses ion)