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apptainer SIF image works in wsl. saba db info
docker-publish #36: Commit 9e4f44b pushed by tin6150
August 4, 2024 18:15 2m 56s jgrg
August 4, 2024 18:15 2m 56s
saba kpsMII seq, but can use amnt db
docker-publish #35: Commit c073739 pushed by tin6150
August 3, 2024 03:14 3m 25s jgrg
August 3, 2024 03:14 3m 25s
minor note update. weasel
docker-publish #34: Commit 0fe9785 pushed by tin6150
April 16, 2024 04:57 3m 20s jgrg.2
April 16, 2024 04:57 3m 20s
docker-publish
docker-publish #33: by tin6150
April 16, 2024 04:57 3m 29s jgrg.1.1
April 16, 2024 04:57 3m 29s
minor note update. weasel
docker-publish #32: Commit 0fe9785 pushed by tin6150
April 16, 2024 04:56 3m 11s jgrg
April 16, 2024 04:56 3m 11s
comment of UPEC genes
docker-publish #31: Commit 85f2560 pushed by tin6150
April 14, 2024 19:33 3m 38s jgrg
April 14, 2024 19:33 3m 38s
add amnt db. disable container signing in workflow
docker-publish #30: Commit 485817d pushed by tin6150
April 4, 2024 19:37 3m 46s jgrg
April 4, 2024 19:37 3m 46s
more ncbi kpsM, none specific to kpsMTII
docker-publish #29: Commit 32b6fbb pushed by tin6150
March 27, 2024 05:07 3m 52s jgrg
March 27, 2024 05:07 3m 52s
still looking for kpsMTII
docker-publish #28: Commit c0b7e30 pushed by tin6150
March 27, 2024 04:42 2m 53s jgrg
March 27, 2024 04:42 2m 53s
kpsMTII was a partial cds and sequence is subset of vfdb kpsM
docker-publish #27: Commit 95f8c7e pushed by tin6150
March 25, 2024 05:35 2m 54s jgrg
March 25, 2024 05:35 2m 54s
added more cross check. look good
docker-publish #26: Commit 0cc374e pushed by tin6150
March 25, 2024 04:47 3m 30s jgrg
March 25, 2024 04:47 3m 30s
2020 Johnson kpsMT II kpsII f primer match sequences_kpsMTII_human_es…
docker-publish #25: Commit 1083a39 pushed by tin6150
March 23, 2024 18:37 3m 0s jgrg
March 23, 2024 18:37 3m 0s
sanity neg ctrl check for kpsMTII
docker-publish #24: Commit bfa1c4b pushed by tin6150
March 23, 2024 05:56 2m 48s jgrg
March 23, 2024 05:56 2m 48s
kpsMTII partial cds from ncbi, as separate fasta, space separated blo…
docker-publish #23: Commit e8bc002 pushed by tin6150
March 22, 2024 05:43 2m 46s jgrg
March 22, 2024 05:43 2m 46s
kpsMT II primers only
docker-publish #22: Commit 7ff4755 pushed by tin6150
March 20, 2024 05:39 3m 42s jgrg
March 20, 2024 05:39 3m 42s
cleanup
docker-publish #21: Commit e306c58 pushed by tin6150
March 14, 2024 02:33 3m 25s jgrg
March 14, 2024 02:33 3m 25s
minor fix, for test/check
docker-publish #20: Commit 509b1bb pushed by tin6150
March 14, 2024 02:24 2m 35s jgrg
March 14, 2024 02:24 2m 35s
abricate in /usr/local/bin need to be a sym link to find dbs
docker-publish #19: Commit c2b91f6 pushed by tin6150
March 14, 2024 02:10 3m 36s jgrg
March 14, 2024 02:10 3m 36s
update dependencies and install process
docker-publish #18: Commit d203323 pushed by tin6150
March 14, 2024 02:08 2m 22s jgrg
March 14, 2024 02:08 2m 22s
going back to version from github web template, to use the newer fn c…
docker-publish #17: Commit 36ee7b1 pushed by tin6150
March 14, 2024 01:48 1m 53s jgrg
March 14, 2024 01:48 1m 53s
ghcr.io security/permission settings info
docker-publish #16: Commit b9d5ded pushed by tin6150
March 14, 2024 01:08 1m 54s jgrg
March 14, 2024 01:08 1m 54s
restoring ubuntu Dockerfile, LABEL dont seems to make ghcr public
docker-publish #15: Commit 7ffe7ae pushed by tin6150
March 13, 2024 17:41 1m 27s jgrg
March 13, 2024 17:41 1m 27s
LABEL and public ghcr...
docker-publish #14: Commit d95cdd5 pushed by tin6150
March 13, 2024 17:34 48s jgrg
March 13, 2024 17:34 48s
temp use rocky 9 base ref perf_tools
docker-publish #13: Commit 4398119 pushed by tin6150
March 13, 2024 17:06 42s jgrg
March 13, 2024 17:06 42s
use COPY rather than git clone
docker-publish #12: Commit 09a33b2 pushed by tin6150
March 13, 2024 17:00 1m 22s jgrg
March 13, 2024 17:00 1m 22s