5.13.0

Release Notes

For: uc-cdis/data-portal

Notes since tag: 5.12.0

Notes to tag/commit: 5.13.0

Generated: 2023-09-21

New Features

• Add a new Guppy Explorer config field filters.tabs.asTextAggFields to
  explicitly specify the filter field names that to be casted from numeric to
  text (#1404)
• This updates the error message for Manhattan plot errors (#1414)
• Updates GWAS App so when user has a finalPopulationSize containing an
  object with a size value of zero, it renders a warning message and prevents
  the user from advancing to the next step (#1414)
• Fixes Atlas URL on QA env (#1414)
• Removes duplicate code between the GWAS and Results app by placing
  instances of duplicate code into a shared util folder (#1414)
• Adjusts Atlas starter to first display list of "team project" options
  available to the user, before opening Atlas (#1414)

Bug Fixes

• Fixed a bug that casts all numeric field in filter into text fields (#1404)
• Fixes bug in GWAS app related to next button being enabled after user
  navigates to previous steps following submission (#1414)

Dependency Updates

• Guppy to 0.17.0 (#1404)

Improvements

• Update VLMD workflow name in kayako template (#1413)

5.12.0

Release Notes

For: uc-cdis/data-portal

Notes since tag: 5.11.1

Notes to tag/commit: 5.12.0

Generated: 2023-09-14

Bug Fixes

• Fix query page styling issue (#1402)
• fix study viewer alphabetical ordering (#1407)
• This resolves a a redirect issue that occurs the following situation:
  (#1356)

• You can reproduce this bug via the following steps (#1356)

• In HEAL envs (QA/preprod/prod) the first time a user is not already logged
  in (#1356)
• Go to the workspace page at /portal/workspace (#1356)
• Portal will redirect you to login page, login with a user that has access
  to workspaces in these envs (#1356)
• Portal should redirect you back to /portal/workspace , but instead, it is
  redirecting you to /portal/portal/workspace (#1356)

New Features

• only allow certain data on HEAL to be available for download with InCommon
  IdP login (#1399)
• add global banner to portal (#1398)
• Adds new "Caution" dismissible message to GWASApp, updates Warning message
  design (#1393)
• Shows new Caution dismissible message in GWASApp in step prior to
  submission after Hare selection if hare population is less than 1000
  (#1393)
• Adds dismissible messages to Results, adds logic to display Caution message
  when hare population is less than 1000 (#1393)
• Updates storybook for new message types and includes a unit test for
  ResultsApp version of Dismissible message component. (#1393)
• Changed error log display in Execution of GWASResults app (#1393)
• Changed storybook file and test file of Execution (#1393)
• Add detailed workspace launch statuses (#1383)

Improvements

• Move ddUrl for RUM to configuration, instead of hardcoding - This is
  necessary for the move to datadog govcloud. (#1410)
• change idp based access check conditions on buttons for ICPSR studies in
  HEAL (#1409)
• use callback hook (#1409)
• housekeeping Fix dev dependency lint errors when running eslint locally
  (#1406)
• Fix the discovery page pop-up text to add spaces where needed (#1396)
• remove unneeded dependencies (#1391)
• move dev dependencies to dev (#1391)

Dependency Updates

• removed (#1391)
• @emotion/react (#1391)
• react-is (#1391)
• redux-devtools (#1391)
• @babel/core (#1391)
• echarts (#1391)
• @babel/preset-stage-0 (#1391)
• @types/jest (#1391)
• babel-plugin-syntax-jsx (#1391)
• estraverse (#1391)
• file-loader (#1391)
• postcss (#1391)
• prettier (#1391)
• relay-compiler-webpack-plugin (#1391)
• moved to dev (#1391)
• mock-local-storage (#1391)
• @storybook/addon-actions (#1391)
• @storybook/react (#1391)
• @types/redux-mock-store (#1391)

Bugfixes

• Resolves issue where server response for a hareResult concept_breakdown is
  null in the SelectHareDropDown.jsx. This can occur when the user selects a
  case cohort size or control cohort size with a value of zero. (#1393)

5.11.1 study viewer bug fix

Release Notes

For: uc-cdis/data-portal

Notes since tag: 5.11.0

Notes to tag/commit: 5.11.1

Generated: 2023-08-14

Bug Fixes

• fix bug in study viewer (#1387)

5.11.0

Release Notes

For: uc-cdis/data-portal

Notes since tag: 5.10.0

Notes to tag/commit: 5.11.0

Generated: 2023-08-11

Improvements

• add more options to Discovery page isAuthorized check (#1380)
• Discovery page update tooltip text (#1382)

Bug Fixes

• Discovery page: remove empty “Tags by category” component (#1381)

New Features

• study descriptions render html tags for br, strong, table, tr, td, th
  (#1369)

Dependency Updates

• "@babel/core": "^7.22.9", (#1366)
• "@emotion/react": "^11.11.1", (#1366)
• "@fortawesome/react-fontawesome": "^0.2.0", (#1366)
• "@gen3/guppy": "^0.16.1", (#1366)
• "@gen3/ui-component": "^0.11.4", (#1366)
• "clipboard-plus": "^1.1.0", (#1366)
• "core-js": "^3.31.1", (#1366)
• "echarts": "^5.4.3", (#1366)
• "echarts-for-react": "^3.0.2", (#1366)
• "enzyme": "^3.11.0", (#1366)
• "enzyme-adapter-react-16": "^1.15.7", (#1366)
• "js-search": "^2.0.1", (#1366)
• "jszip": "^3.10.1", (#1366)
• "lodash": "^4.17.21", (#1366)
• "mock-local-storage": "^1.1.24", (#1366)
• "prop-types": "^15.8.1", (#1366)
• "react-query": "^3.39.3", (#1366)
• "react-virtualized": "^9.22.5", (#1366)
• "recharts": "^2.7.2", (#1366)
• "redux": "^4.2.1", (#1366)
• "redux-thunk": "^2.4.2", (#1366)
• "regenerator-runtime": "^0.13.11", (#1366)
• "semver": "^7.5.4", (#1366)
• "@babel/eslint-parser": "^7.22.9", (#1366)
• "@babel/plugin-proposal-object-rest-spread": "^7.20.7", (#1366)
• "@babel/plugin-transform-modules-commonjs": "^7.22.5", (#1366)
• "@babel/plugin-transform-runtime": "^7.22.9", (#1366)
• "@babel/preset-env": "^7.22.9", (#1366)
• "@babel/preset-react": "^7.22.5", (#1366)
• "@babel/runtime-corejs3": "^7.22.6", (#1366)
• "@storybook/cli": "^7.1.1", (#1366)
• "@testing-library/jest-dom": "^5.17.0", (#1366)
• "@types/core-js": "^2.5.5", (#1366)
• "@types/enzyme": "^3.10.13", (#1366)
• "@types/react-redux": "^7.1.25", (#1366)
• "@types/regenerator-runtime": "^0.13.1", (#1366)
• "babel-plugin-dev-expression": "^0.2.3", (#1366)
• "eslint-plugin-import": "^2.27.5", (#1366)
• "eslint-plugin-jsx-a11y": "^6.7.1", (#1366)
• "eslint-plugin-react": "~7.33.0", (#1366)
• "eslint-plugin-react-hooks": "^4.6.0", (#1366)
• "eslint-plugin-storybook": "^0.6.13", (#1366)
• "jest-localstorage-mock": "^2.4.26", (#1366)
• "msw-storybook-addon": "^1.8.0", (#1366)
• "postcss": "^8.4.27", (#1366)
• "redux-mock-store": "^1.5.4", (#1366)
• "relay-compiler-webpack-plugin": "^9.1.0", (#1366)
• "stylelint": "^15.10.2", (#1366)

5.10.0

Release Notes

For: uc-cdis/data-portal

Notes since tag: 5.9.0

Notes to tag/commit: f02c112

Generated: 2023-08-07

Bug Fixes

• GWAS Results app: Run Duration shows correct duration instead of “Invalid
  date” in Execution view (#1378)
• This resolves odd UI behavior that was the result of the incorrectly
  implemented initialTableSort function. (#1377)
• This version ensures that disabling of workspace launch button when no pay model is selected, happens only for commons with pay models enabled. (#1374)

New Features

• This updates the results App so that back button is hidden when not on home
  view, and shown on the app's home view. (#1377)
• New features and some bug fixes for VADC GWAS apps, including multiple
  improvements to the GWAS Results Viewer (see details
  here)
  (#1372)

Improvements

• Unit test written to validate initialTableSort function. (#1377)
• Pay model resets as soon as a workspace session is terminated (#1374)
• Workspace launch is restricted when current paymodel is not set for commons where pay models are available. (#1374)

Dependency Updates

• Added d3-axis, d3-format, d3-tip (#1372)

5.9.0: Discovery page supports for nested field names

Release Notes

For: uc-cdis/data-portal

Notes since tag: 5.8.0

Notes to tag/commit: 5.9.0

Generated: 2023-07-31

New Features

• Updates to Study Registration / VLMD Submission page to support nested
  fields (#1365)
• update clinicaltrials.gov api to classic endpoint (#1365)
• Disocvery page: study details fields, discovery table fields, aggregation
  fields and search fields now supports using JSONPath
  syntax to represent
  nested fields in metadata (#1324)

Improvements

• Replace the Dropdown text with Select a Pay model when there is no
  current_pay_model available. (#1368)
• Prevent getWorkspacePayModel from returning null when there is no
  current_pay_model (#1368)
• When there is no current_pay_model available, disable the Launch button (#1368)
• Add an Alert message asking the user to choose a pay model (#1368)

Dependency Updates

• Adds: "jsonpath": "^1.1.1", (#1324)

discovery page mds ability to select guidTyp

Release Notes

For: uc-cdis/data-portal

Notes since tag: 5.7.1

Notes to tag/commit: 5.8.0

Generated: 2023-07-10

New Features

• add to discovery page setup ability to select guidType for the api call,
  this allows for displaying only select mds records on the discovery page
  (#1357)

Improvements

• Add warning for workspace user for waiting for proxy step (#1347)
• add to requiredIdpField docs to better explain what is going on (#1344)

5.7.1

Release Notes

For: uc-cdis/data-portal

Notes since tag: 5.7.0

Notes to tag/commit: 5.7.1

Generated: 2023-06-21

Bug Fixes

• remove duplicate padding (#1333)
• Fix Profile Page visual inconsistency (#1333)
• fix bug where filters don't reset table to page one (#1330)
• fixed position should fix the bug where popup appear in the hidden
  (scrolled past) area (#1298)

Improvements

• File page: improve display of array values (#1327)
• use new guppy count field instead of calculating it (#981)
• CSS update to handle newlines better in Discovery modal (#1289)

5.7.0

Release Notes

For: uc-cdis/data-portal

Notes since tag: 5.6.2

Notes to tag/commit: 5.7.0
Generated: 2023-05-23

Dependency Updates

• updating guppy to 0.16.0 (#1309)

Deployment Changes

• will require server to also be using guppy ^0.16.0 on backend (#1309)

New Features

• Add no access description for File page (#1301)
• Results App V2: Add message to spinner while loading the main table in
  Results app (#1303)
• Results App V2: Add filtering to the home table in Results App V2 for the
  first five columns and allows for the user to filter by text input,
  dropdown selection, and date range selection. (#1303)

Improvements

• Add ignore for *.conf files in eslint-new command. (#1303)

5.6.2

Release Notes

For: uc-cdis/data-portal

Notes since tag: 5.6.1

Notes to tag/commit: 5.6.2

Generated: 2023-05-11

Bug Fixes

• This update resolves the following bug: Portal incorrectly block user
  from creating a workspace access request if the user has a study reg access
  request pending. (#1297)
• This also changes the text shown to a user when they make a request while
  they already have a pending workspace access request. (#1297)

Improvements

• fix incorrect button size (#1302)
• removed old GWASResults app (#1296)
• moved new app into old place (#1296)