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use updated clade file
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yilin xu authored and yilin xu committed Jan 19, 2021
1 parent f3132e5 commit 23f3319
Showing 1 changed file with 58 additions and 2 deletions.
60 changes: 58 additions & 2 deletions config/clades.tsv
Original file line number Diff line number Diff line change
@@ -1,18 +1,74 @@
clade gene site alt

19A nuc 8782 C
19A nuc 14408 C
19A nuc 14408 C

19B nuc 8782 T
19B nuc 28144 C

20A nuc 8782 C
20A nuc 14408 T
20A nuc 23403 G

20B nuc 8782 C
20B nuc 14408 T
20B nuc 23403 G
20B nuc 28881 A
20B nuc 28882 A

20C nuc 1059 T
20C nuc 8782 C
20C nuc 14408 T
20C nuc 23403 G
20C nuc 25563 T
20C nuc 25563 T

20D nuc 4002 T
20D nuc 10097 A
20D nuc 13536 T
20D nuc 23731 T

20E (EU1) nuc 8782 C
20E (EU1) nuc 14408 T
20E (EU1) nuc 23403 G
20E (EU1) nuc 22227 T
20E (EU1) nuc 28932 T
20E (EU1) nuc 29645 T

20F nuc 1163 T
20F nuc 7540 C
20F nuc 16647 T
20F nuc 18555 T
20F nuc 22992 A
20F nuc 23401 A

20G nuc 10319 T
20G nuc 18424 G
20G nuc 21304 T
20G nuc 25907 T
20G nuc 27964 T
20G nuc 28472 T
20G nuc 28869 T

20H/501Y.V2 nuc 1059 T
20H/501Y.V2 nuc 8782 C
20H/501Y.V2 nuc 14408 T
20H/501Y.V2 nuc 23403 G
20H/501Y.V2 nuc 25563 T
20H/501Y.V2 nuc 23063 T
20H/501Y.V2 nuc 23012 A

20I/501Y.V1 nuc 8782 C
20I/501Y.V1 nuc 14408 T
20I/501Y.V1 nuc 23403 G
20I/501Y.V1 nuc 28881 A
20I/501Y.V1 nuc 28882 A
20I/501Y.V1 nuc 23063 T
20I/501Y.V1 nuc 14676 T
20I/501Y.V1 nuc 15279 T

20J/501Y.V3 nuc 733 C
20J/501Y.V3 nuc 2749 T
20J/501Y.V3 nuc 3828 T
20J/501Y.V3 nuc 5648 C
20J/501Y.V3 nuc 12778 T
20J/501Y.V3 nuc 13860 T

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