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DockQ Public
Forked from bjornwallner/DockQDockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models
Python MIT License UpdatedNov 27, 2024 -
AF_unmasked Public
Forked from clami66/AF_unmaskedSource code and examples for AlphaFold Unmasked
Python Apache License 2.0 UpdatedNov 13, 2024 -
AlphaLink2 Public
Forked from Rappsilber-Laboratory/AlphaLink2AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer
Python Creative Commons Attribution 4.0 International UpdatedSep 2, 2024 -
DiffPaSS Public
Forked from Bitbol-Lab/DiffPaSSDifferentiable Pairing using Soft Scores
Jupyter Notebook Apache License 2.0 UpdatedMay 31, 2024 -
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JClinic Public
Simple protein property prediction
Jupyter Notebook Apache License 2.0 UpdatedSep 17, 2023 -
alphafold Public
Forked from google-deepmind/alphafoldOpen source code for AlphaFold.
Python Apache License 2.0 UpdatedFeb 20, 2023 -
giotto-ph Public
Forked from giotto-ai/giotto-phHigh performance implementation of Vietoris-Rips persistence.
C++ Other UpdatedSep 19, 2022 -
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staged-recipes Public
Forked from conda-forge/staged-recipesA place to submit conda recipes before they become fully fledged conda-forge feedstocks
Python BSD 3-Clause "New" or "Revised" License UpdatedAug 22, 2022 -
DIPOLE Public
Forked from aywagner/DIPOLEDIstributed Persistence-Optimized Local Embeddings
Python MIT License UpdatedJun 16, 2022 -
ColabFold Public
Forked from sokrypton/ColabFoldMaking Protein folding accessible to all via Google Colab!
Jupyter Notebook MIT License UpdatedDec 8, 2021 -
giotto-tda_demo Public
Supporting repository for tutorial sessions on giotto-tda
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gitignore Public
Forked from github/gitignoreA collection of useful .gitignore templates
Creative Commons Zero v1.0 Universal UpdatedNov 3, 2021 -
ripser.py Public
Forked from scikit-tda/ripser.pyA Lean Persistent Homology Library for Python
C++ Other UpdatedSep 19, 2021 -
ripser Public
Forked from Ripser/ripserRipser: efficient computation of Vietoris–Rips persistence barcodes
C++ MIT License UpdatedAug 10, 2021 -
swalign Public
Forked from mbreese/swalignSmith-Waterman local aligner
Python Other UpdatedMay 12, 2021 -
PerMaViss Public
Forked from atorras1618/PerMaVissPersistence Mayer Vietoris spectral sequence
Python MIT License UpdatedApr 27, 2021 -
cechmate Public
Forked from scikit-tda/cechmateCustom filtration constructors for Python
Python MIT License UpdatedApr 22, 2021 -
CCMgen Public
Forked from soedinglab/CCMgenHTML GNU Affero General Public License v3.0 UpdatedMar 16, 2021 -
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flagser Public
Forked from luetge/flagserComputing homology of directed flag complexes (based on https://github.com/Ripser/ripser). Online version: https://homepages.abdn.ac.uk/neurotopology/flagser.html
C++ MIT License UpdatedJan 12, 2021 -
gudhi-devel Public
Forked from giotto-ai/gudhi-develThe GUDHI library is a generic open source C++ library, with a Python interface, for Topological Data Analysis (TDA) and Higher Dimensional Geometry Understanding.
C++ MIT License UpdatedDec 19, 2020 -
gumbel-sinkhorn Public
Forked from perrying/gumbel-sinkhornPyTorch implementation of LEARNING LATENT PERMUTATIONS WITH GUMBEL-SINKHORN NETWORKS
Python UpdatedMar 14, 2020 -
L2F_Tennis_Challenge Public
Machine learn an improved Roger Federer and consistently beat Rafael Nadal!
Jupyter Notebook GNU General Public License v3.0 UpdatedSep 13, 2019 -