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Related to https://github.com/SUSE/spacewalk/issues/25285
All flags were being set as global flags belonging to the RootCmd, resulting in help messages displaying all flags even though they were not actually in use by the specific command.
This PR addresses the issue by defining flags that are only meaningful for a command VS global (parent inherited) flags.
The parsing of the configuration .yaml file is also postponed to the actual moment it is needed by the sub-commands.