This repository has been archived by the owner on Apr 19, 2023. It is now read-only.
v0.14.0
Summary of changes:
- Add cellranger-atac workflow; Merge #89: Implement #134
- Allow to skip filtering and/or normalization step; Merge #163: Implement #149
- Implemented for the following pipelines:
single_sample
,bbknn
,harmony
,mnncorrect
pipelines
- Implemented for the following pipelines:
- Add support for Seurat Rds; Merge #162: implement #153
- Improve report notebooks for clustering, bbknn and mnncorrect #159 #160 (
scanpy
) - Improve report notebooks for harmony #159 #160 (
harmony
) - Fix #155
- Fix #158 (
pcacv
,harmony
) - Other changes 657e1bc vib-singlecell-nf/scenic@244830b