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This repository has been archived by the owner on Apr 19, 2023. It is now read-only.

v0.14.0

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@dweemx dweemx released this 10 Mar 16:01
· 2157 commits to master since this release

Summary of changes:

  • Add cellranger-atac workflow; Merge #89: Implement #134
  • Allow to skip filtering and/or normalization step; Merge #163: Implement #149
    • Implemented for the following pipelines: single_sample, bbknn, harmony, mnncorrect pipelines
  • Add support for Seurat Rds; Merge #162: implement #153
  • Improve report notebooks for clustering, bbknn and mnncorrect #159 #160 (scanpy)
  • Improve report notebooks for harmony #159 #160 (harmony)
  • Fix #155
  • Fix #158 (pcacv, harmony)
  • Other changes 657e1bc vib-singlecell-nf/scenic@244830b