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Hourly export update
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actions-user committed Jan 14, 2025
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18 changes: 9 additions & 9 deletions bugsigdb_signatures_genus_metaphlan.gmt
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18 changes: 9 additions & 9 deletions bugsigdb_signatures_genus_metaphlan_exact.gmt
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16 changes: 8 additions & 8 deletions bugsigdb_signatures_genus_ncbi.gmt
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# BugSigDB 2025-01-14_13:02_UTC, License: Creative Commons Attribution 4.0 International, URL: https://bugsigdb.org
# BugSigDB 2025-01-14_13:58_UTC, License: Creative Commons Attribution 4.0 International, URL: https://bugsigdb.org
bsdb:1/1/1_Colorectal-adenoma:conventional-adenoma-cases_vs_controls_UP NA 1654 1716 1301 162289 189330 33024 40544 2759736 1386
bsdb:1/1/2_Colorectal-adenoma:conventional-adenoma-cases_vs_controls_DOWN NA 100883
bsdb:1/2/1_Hyperplastic-Polyp:hyperplastic-polyp-cases_vs_controls_UP NA 207244 2759736
Expand Down Expand Up @@ -4575,13 +4575,13 @@ bsdb:1086/8/2_Phenylketonuria:ChPKU-S-(PKU-children-saliva)-patients_vs_ChCtrlRe
bsdb:1086/9/1_Phenylketonuria:Control-Subgingival-plaque-(Ctrl-SP)-patients_vs_Control-Saliva-(Ctrl-S)-patients_UP NA 1283313 1380 1378 724 482 265975 1257 836 838 1213720 1301 29465 508215 1164882
bsdb:1086/9/2_Phenylketonuria:Control-Subgingival-plaque-(Ctrl-SP)-patients_vs_Control-Saliva-(Ctrl-S)-patients_DOWN NA 416916 2801844 194 1016 2717 1716 848 32257 32067 133925 970 195950
bsdb:1086/10/1_Phenylketonuria:Control-Adults-Subgingival-plaque-(Ctrl-Adults-SP)-patients_vs_Control-Adults-Saliva-(Ctrl-Adults-S)-patients_UP NA 1283313 1380 1378 724 482 265975 1257 836 838 1213720 1301 29465 508215
bsdb:1086/10/2_Phenylketonuria:Control-Adults-Subgingival-plaque-(Ctrl-Adults-SP)-patients_vs_Control-Adults-Saliva-(Ctrl-Adults-S)-patients_DOWN NA 416916 2801844 194 1016 2717 1716 848 32257 133925 970 195950
bsdb:1086/11/1_Phenylketonuria:Control-Children-(CTRL-Ch-SP)_vs_Control-Children-(CTRL-Ch-S)_UP NA 838 265975 836 482 1283313 1380 1378 724 1257 1213720 1301 29465
bsdb:1086/11/2_Phenylketonuria:Control-Children-(CTRL-Ch-SP)_vs_Control-Children-(CTRL-Ch-S)_DOWN NA 1016 848 1716 32257 2801844 2717 133925 195950 194 1434006
bsdb:1086/12/1_Phenylketonuria:Phenylketonuria-(PKU-SP)_vs_Phenylketonuria-(PKU-S)_UP NA 1283313 1380 1378 724 1164882 482 265975 1257 836 838 508215 1213720 1301 29465
bsdb:1086/12/2_Phenylketonuria:Phenylketonuria-(PKU-SP)_vs_Phenylketonuria-(PKU-S)_DOWN NA 1654 416916 2801844 194 1016 2717 1716 1434006 848 32257 47670 133925 2740 970 195950
bsdb:1086/13/1_Phenylketonuria:Phenylketonuria-Adults-(PKU-SP)_vs_Phenylketonuria-Adults-(PKU-S)_UP NA 838 508215 1164882 1283313 1380 1378 724 1213720 1301 29465
bsdb:1086/13/2_Phenylketonuria:Phenylketonuria-Adults-(PKU-SP)_vs_Phenylketonuria-Adults-(PKU-S)_DOWN NA 194 2740 133925 2717 1654 970 2801844 1434006 1716 848 1016
bsdb:1086/10/2_Phenylketonuria:Control-Adults-Subgingival-plaque-(Ctrl-Adults-SP)-patients_vs_Control-Adults-Saliva-(Ctrl-Adults-S)-patients_DOWN NA 416916 2801844 194 1016 2717 1716 848 970 195950
bsdb:1086/11/1_Phenylketonuria:Control-Children-Subgingival-plaque-(Ctrl-Ch-SP)-patients_vs_Control-Children-Saliva-(Ctrl-Ch-S)-patients_UP NA 1283313 1380 1378 724 482 265975 1257 836 838 1213720 1301 29465 508215
bsdb:1086/11/2_Phenylketonuria:Control-Children-Subgingival-plaque-(Ctrl-Ch-SP)-patients_vs_Control-Children-Saliva-(Ctrl-Ch-S)-patients_DOWN NA 2801844 194 1016 2717 1716 848 195950 970 416916
bsdb:1086/12/1_Phenylketonuria:Phenylketonuria-Subgingival-plaque-(PKU-SP)-patients_vs_Phenylketonuria-Saliva-(PKU-S)-patients_UP NA 1283313 1380 1378 724 1164882 482 265975 1257 836 838 508215 1213720 1301 29465
bsdb:1086/12/2_Phenylketonuria:Phenylketonuria-Subgingival-plaque-(PKU-SP)-patients_vs_Phenylketonuria-Saliva-(PKU-S)-patients_DOWN NA 1654 2801844 194 1016 2717 1716 1434006 848 32257 2740 970 195950 133925
bsdb:1086/13/1_Phenylketonuria:Phenylketonuria-Adults-Subgingival-plaque-(PKU-Adults-SP)_vs_Phenylketonuria-Adults-Saliva-(PKU-Adults-S)_UP NA 838 508215 1164882 1283313 1380 1378 724 1213720 1301 29465
bsdb:1086/13/2_Phenylketonuria:Phenylketonuria-Adults-Subgingival-plaque-(PKU-Adults-SP)_vs_Phenylketonuria-Adults-Saliva-(PKU-Adults-S)_DOWN NA 194 2740 133925 2717 1654 970 2801844 1434006 1716 848 1016
bsdb:1086/14/1_Phenylketonuria:Phenylketonuria-Ch-(PKU-SP)_vs_Phenylketonuria-Ch-(PKU-S)_UP NA 1283313 1380 1378 724 1164882 482 1257 836 838 1301 29465
bsdb:1086/14/2_Phenylketonuria:Phenylketonuria-Ch-(PKU-SP)_vs_Phenylketonuria-Ch-(PKU-S)_DOWN NA 194 195950 2740 133925 2717 1654 970 32257 1434006 1716 848 1016 2801844
bsdb:1087/1/4_Schizophrenia:SCZ:-individuals-with-a-psychiatric-diagnosis-of-schizophrenia_vs_control-individuals-without-a-psychiatric-diagnosis-(past-or-present)_UP NA 244127 572511 84111 561 644652 1649459
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16 changes: 8 additions & 8 deletions bugsigdb_signatures_genus_ncbi_exact.gmt
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# BugSigDB 2025-01-14_13:02_UTC, License: Creative Commons Attribution 4.0 International, URL: https://bugsigdb.org
# BugSigDB 2025-01-14_13:58_UTC, License: Creative Commons Attribution 4.0 International, URL: https://bugsigdb.org
bsdb:1/1/1_Colorectal-adenoma:conventional-adenoma-cases_vs_controls_UP NA 1654 1716 1301 162289 189330 33024 40544 1386
bsdb:1/1/2_Colorectal-adenoma:conventional-adenoma-cases_vs_controls_DOWN NA 100883
bsdb:1/2/1_Hyperplastic-Polyp:hyperplastic-polyp-cases_vs_controls_UP NA 207244
Expand Down Expand Up @@ -3830,13 +3830,13 @@ bsdb:1086/8/2_Phenylketonuria:ChPKU-S-(PKU-children-saliva)-patients_vs_ChCtrlRe
bsdb:1086/9/1_Phenylketonuria:Control-Subgingival-plaque-(Ctrl-SP)-patients_vs_Control-Saliva-(Ctrl-S)-patients_UP NA 1283313 1380 1378 724 482 265975 1257 836 838 1213720 1301 29465 508215 1164882
bsdb:1086/9/2_Phenylketonuria:Control-Subgingival-plaque-(Ctrl-SP)-patients_vs_Control-Saliva-(Ctrl-S)-patients_DOWN NA 416916 2801844 194 1016 2717 1716 848 32257 32067 133925 970 195950
bsdb:1086/10/1_Phenylketonuria:Control-Adults-Subgingival-plaque-(Ctrl-Adults-SP)-patients_vs_Control-Adults-Saliva-(Ctrl-Adults-S)-patients_UP NA 1283313 1380 1378 724 482 265975 1257 836 838 1213720 1301 29465 508215
bsdb:1086/10/2_Phenylketonuria:Control-Adults-Subgingival-plaque-(Ctrl-Adults-SP)-patients_vs_Control-Adults-Saliva-(Ctrl-Adults-S)-patients_DOWN NA 416916 2801844 194 1016 2717 1716 848 32257 133925 970 195950
bsdb:1086/11/1_Phenylketonuria:Control-Children-(CTRL-Ch-SP)_vs_Control-Children-(CTRL-Ch-S)_UP NA 838 265975 836 482 1283313 1380 1378 724 1257 1213720 1301 29465
bsdb:1086/11/2_Phenylketonuria:Control-Children-(CTRL-Ch-SP)_vs_Control-Children-(CTRL-Ch-S)_DOWN NA 1016 848 1716 32257 2801844 2717 133925 195950 194 1434006
bsdb:1086/12/1_Phenylketonuria:Phenylketonuria-(PKU-SP)_vs_Phenylketonuria-(PKU-S)_UP NA 1283313 1380 1378 724 1164882 482 265975 1257 836 838 508215 1213720 1301 29465
bsdb:1086/12/2_Phenylketonuria:Phenylketonuria-(PKU-SP)_vs_Phenylketonuria-(PKU-S)_DOWN NA 1654 416916 2801844 194 1016 2717 1716 1434006 848 32257 47670 133925 2740 970 195950
bsdb:1086/13/1_Phenylketonuria:Phenylketonuria-Adults-(PKU-SP)_vs_Phenylketonuria-Adults-(PKU-S)_UP NA 838 508215 1164882 1283313 1380 1378 724 1213720 1301 29465
bsdb:1086/13/2_Phenylketonuria:Phenylketonuria-Adults-(PKU-SP)_vs_Phenylketonuria-Adults-(PKU-S)_DOWN NA 194 2740 133925 2717 1654 970 2801844 1434006 1716 848 1016
bsdb:1086/10/2_Phenylketonuria:Control-Adults-Subgingival-plaque-(Ctrl-Adults-SP)-patients_vs_Control-Adults-Saliva-(Ctrl-Adults-S)-patients_DOWN NA 416916 2801844 194 1016 2717 1716 848 970 195950
bsdb:1086/11/1_Phenylketonuria:Control-Children-Subgingival-plaque-(Ctrl-Ch-SP)-patients_vs_Control-Children-Saliva-(Ctrl-Ch-S)-patients_UP NA 1283313 1380 1378 724 482 265975 1257 836 838 1213720 1301 29465 508215
bsdb:1086/11/2_Phenylketonuria:Control-Children-Subgingival-plaque-(Ctrl-Ch-SP)-patients_vs_Control-Children-Saliva-(Ctrl-Ch-S)-patients_DOWN NA 2801844 194 1016 2717 1716 848 195950 970 416916
bsdb:1086/12/1_Phenylketonuria:Phenylketonuria-Subgingival-plaque-(PKU-SP)-patients_vs_Phenylketonuria-Saliva-(PKU-S)-patients_UP NA 1283313 1380 1378 724 1164882 482 265975 1257 836 838 508215 1213720 1301 29465
bsdb:1086/12/2_Phenylketonuria:Phenylketonuria-Subgingival-plaque-(PKU-SP)-patients_vs_Phenylketonuria-Saliva-(PKU-S)-patients_DOWN NA 1654 2801844 194 1016 2717 1716 1434006 848 32257 2740 970 195950 133925
bsdb:1086/13/1_Phenylketonuria:Phenylketonuria-Adults-Subgingival-plaque-(PKU-Adults-SP)_vs_Phenylketonuria-Adults-Saliva-(PKU-Adults-S)_UP NA 838 508215 1164882 1283313 1380 1378 724 1213720 1301 29465
bsdb:1086/13/2_Phenylketonuria:Phenylketonuria-Adults-Subgingival-plaque-(PKU-Adults-SP)_vs_Phenylketonuria-Adults-Saliva-(PKU-Adults-S)_DOWN NA 194 2740 133925 2717 1654 970 2801844 1434006 1716 848 1016
bsdb:1086/14/1_Phenylketonuria:Phenylketonuria-Ch-(PKU-SP)_vs_Phenylketonuria-Ch-(PKU-S)_UP NA 1283313 1380 1378 724 1164882 482 1257 836 838 1301 29465
bsdb:1086/14/2_Phenylketonuria:Phenylketonuria-Ch-(PKU-SP)_vs_Phenylketonuria-Ch-(PKU-S)_DOWN NA 194 195950 2740 133925 2717 1654 970 32257 1434006 1716 848 1016 2801844
bsdb:1088/1/1_Schizophrenia:SCZF:-patients-with-schizophrenia_vs_HCF:-healthy-controls-(no-psychiatric-diagnosis-of-schizophrenia)_UP NA 1654 1663 102106 106589 1730 88 13159 354349 286 113286 620
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16 changes: 8 additions & 8 deletions bugsigdb_signatures_genus_taxname.gmt
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# BugSigDB 2025-01-14_13:02_UTC, License: Creative Commons Attribution 4.0 International, URL: https://bugsigdb.org
# BugSigDB 2025-01-14_13:58_UTC, License: Creative Commons Attribution 4.0 International, URL: https://bugsigdb.org
bsdb:1/1/1_Colorectal-adenoma:conventional-adenoma-cases_vs_controls_UP NA Actinomyces Corynebacterium Streptococcus Peptoniphilus Dorea Phascolarctobacterium Sutterella Lacticaseibacillus Bacillus
bsdb:1/1/2_Colorectal-adenoma:conventional-adenoma-cases_vs_controls_DOWN NA Coprobacillus
bsdb:1/2/1_Hyperplastic-Polyp:hyperplastic-polyp-cases_vs_controls_UP NA Anaerostipes Lacticaseibacillus
Expand Down Expand Up @@ -4575,13 +4575,13 @@ bsdb:1086/8/2_Phenylketonuria:ChPKU-S-(PKU-children-saliva)-patients_vs_ChCtrlRe
bsdb:1086/9/1_Phenylketonuria:Control-Subgingival-plaque-(Ctrl-SP)-patients_vs_Control-Saliva-(Ctrl-S)-patients_UP NA Alloprevotella Atopobium Gemella Haemophilus Neisseria Oribacterium Peptostreptococcus Porphyromonas Prevotella Stomatobaculum Streptococcus Veillonella Rothia Lachnoanaerobaculum
bsdb:1086/9/2_Phenylketonuria:Control-Subgingival-plaque-(Ctrl-SP)-patients_vs_Control-Saliva-(Ctrl-S)-patients_DOWN NA Aggregatibacter Arachnia Campylobacter Capnocytophaga Cardiobacterium Corynebacterium Fusobacterium Kingella Leptotrichia Olsenella Selenomonas Tannerella
bsdb:1086/10/1_Phenylketonuria:Control-Adults-Subgingival-plaque-(Ctrl-Adults-SP)-patients_vs_Control-Adults-Saliva-(Ctrl-Adults-S)-patients_UP NA Alloprevotella Atopobium Gemella Haemophilus Neisseria Oribacterium Peptostreptococcus Porphyromonas Prevotella Stomatobaculum Streptococcus Veillonella Rothia
bsdb:1086/10/2_Phenylketonuria:Control-Adults-Subgingival-plaque-(Ctrl-Adults-SP)-patients_vs_Control-Adults-Saliva-(Ctrl-Adults-S)-patients_DOWN NA Aggregatibacter Arachnia Campylobacter Capnocytophaga Cardiobacterium Corynebacterium Fusobacterium Kingella Olsenella Selenomonas Tannerella
bsdb:1086/11/1_Phenylketonuria:Control-Children-(CTRL-Ch-SP)_vs_Control-Children-(CTRL-Ch-S)_UP NA Prevotella Oribacterium Porphyromonas Neisseria Alloprevotella Atopobium Gemella Haemophilus Peptostreptococcus Stomatobaculum Streptococcus Veillonella
bsdb:1086/11/2_Phenylketonuria:Control-Children-(CTRL-Ch-SP)_vs_Control-Children-(CTRL-Ch-S)_DOWN NA Capnocytophaga Fusobacterium Corynebacterium Kingella Arachnia Cardiobacterium Olsenella Tannerella Campylobacter Fretibacterium
bsdb:1086/12/1_Phenylketonuria:Phenylketonuria-(PKU-SP)_vs_Phenylketonuria-(PKU-S)_UP NA Alloprevotella Atopobium Gemella Haemophilus Lachnoanaerobaculum Neisseria Oribacterium Peptostreptococcus Porphyromonas Prevotella Rothia Stomatobaculum Streptococcus Veillonella
bsdb:1086/12/2_Phenylketonuria:Phenylketonuria-(PKU-SP)_vs_Phenylketonuria-(PKU-S)_DOWN NA Actinomyces Aggregatibacter Arachnia Campylobacter Capnocytophaga Cardiobacterium Corynebacterium Fretibacterium Fusobacterium Kingella Lautropia Olsenella Peptococcus Selenomonas Tannerella
bsdb:1086/13/1_Phenylketonuria:Phenylketonuria-Adults-(PKU-SP)_vs_Phenylketonuria-Adults-(PKU-S)_UP NA Prevotella Rothia Lachnoanaerobaculum Alloprevotella Atopobium Gemella Haemophilus Stomatobaculum Streptococcus Veillonella
bsdb:1086/13/2_Phenylketonuria:Phenylketonuria-Adults-(PKU-SP)_vs_Phenylketonuria-Adults-(PKU-S)_DOWN NA Campylobacter Peptococcus Olsenella Cardiobacterium Actinomyces Selenomonas Arachnia Fretibacterium Corynebacterium Fusobacterium Capnocytophaga
bsdb:1086/10/2_Phenylketonuria:Control-Adults-Subgingival-plaque-(Ctrl-Adults-SP)-patients_vs_Control-Adults-Saliva-(Ctrl-Adults-S)-patients_DOWN NA Aggregatibacter Arachnia Campylobacter Capnocytophaga Cardiobacterium Corynebacterium Fusobacterium Selenomonas Tannerella
bsdb:1086/11/1_Phenylketonuria:Control-Children-Subgingival-plaque-(Ctrl-Ch-SP)-patients_vs_Control-Children-Saliva-(Ctrl-Ch-S)-patients_UP NA Alloprevotella Atopobium Gemella Haemophilus Neisseria Oribacterium Peptostreptococcus Porphyromonas Prevotella Stomatobaculum Streptococcus Veillonella Rothia
bsdb:1086/11/2_Phenylketonuria:Control-Children-Subgingival-plaque-(Ctrl-Ch-SP)-patients_vs_Control-Children-Saliva-(Ctrl-Ch-S)-patients_DOWN NA Arachnia Campylobacter Capnocytophaga Cardiobacterium Corynebacterium Fusobacterium Tannerella Selenomonas Aggregatibacter
bsdb:1086/12/1_Phenylketonuria:Phenylketonuria-Subgingival-plaque-(PKU-SP)-patients_vs_Phenylketonuria-Saliva-(PKU-S)-patients_UP NA Alloprevotella Atopobium Gemella Haemophilus Lachnoanaerobaculum Neisseria Oribacterium Peptostreptococcus Porphyromonas Prevotella Rothia Stomatobaculum Streptococcus Veillonella
bsdb:1086/12/2_Phenylketonuria:Phenylketonuria-Subgingival-plaque-(PKU-SP)-patients_vs_Phenylketonuria-Saliva-(PKU-S)-patients_DOWN NA Actinomyces Arachnia Campylobacter Capnocytophaga Cardiobacterium Corynebacterium Fretibacterium Fusobacterium Kingella Peptococcus Selenomonas Tannerella Olsenella
bsdb:1086/13/1_Phenylketonuria:Phenylketonuria-Adults-Subgingival-plaque-(PKU-Adults-SP)_vs_Phenylketonuria-Adults-Saliva-(PKU-Adults-S)_UP NA Prevotella Rothia Lachnoanaerobaculum Alloprevotella Atopobium Gemella Haemophilus Stomatobaculum Streptococcus Veillonella
bsdb:1086/13/2_Phenylketonuria:Phenylketonuria-Adults-Subgingival-plaque-(PKU-Adults-SP)_vs_Phenylketonuria-Adults-Saliva-(PKU-Adults-S)_DOWN NA Campylobacter Peptococcus Olsenella Cardiobacterium Actinomyces Selenomonas Arachnia Fretibacterium Corynebacterium Fusobacterium Capnocytophaga
bsdb:1086/14/1_Phenylketonuria:Phenylketonuria-Ch-(PKU-SP)_vs_Phenylketonuria-Ch-(PKU-S)_UP NA Alloprevotella Atopobium Gemella Haemophilus Lachnoanaerobaculum Neisseria Peptostreptococcus Porphyromonas Prevotella Streptococcus Veillonella
bsdb:1086/14/2_Phenylketonuria:Phenylketonuria-Ch-(PKU-SP)_vs_Phenylketonuria-Ch-(PKU-S)_DOWN NA Campylobacter Tannerella Peptococcus Olsenella Cardiobacterium Actinomyces Selenomonas Kingella Fretibacterium Corynebacterium Fusobacterium Capnocytophaga Arachnia
bsdb:1087/1/4_Schizophrenia:SCZ:-individuals-with-a-psychiatric-diagnosis-of-schizophrenia_vs_control-individuals-without-a-psychiatric-diagnosis-(past-or-present)_UP NA Anaerotruncus Blautia Eggerthella Escherichia Gordonibacter Hungatella
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