Merge pull request #1 from xmos/feature/jenkins

update to run CI build

Jenkinsfile

@@ -5,7 +5,7 @@ getApproval()
 pipeline {
     agent {
         dockerfile {
-            args "-v /home/jenkins/.keras:/root/.keras"
+            args ""
         }
     }
 
@@ -15,11 +15,6 @@ pipeline {
             defaultValue: '15.0.1',
             description: 'The tools version to build with (check /projects/tools/ReleasesTools/)'
         )
-        booleanParam( // use to check results of rolling all conda deps forward
-            name: 'UPDATE_ALL',
-            defaultValue: false,
-            description: 'Update all conda packages before building'
-        )
     }
 
     options { // plenty of things could go here
@@ -46,10 +41,10 @@ pipeline {
                                   recursiveSubmodules: true],
                                  [$class: 'CleanCheckout']],
                     userRemoteConfigs: [[credentialsId: 'xmos-bot',
-                                         url: '[email protected]:xmos/ai_tools']]
+                                         url: '[email protected]:xmos/lib_nn']]
                 ])
                 // create venv
-                sh "conda env create -q -p ai_tools_venv -f environment.yml"
+                sh "conda env create -q -p lib_nn_venv -f environment.yml"
                 // Install xmos tools version
                 sh "/XMOS/get_tools.py " + params.TOOLS_VERSION
             }
@@ -58,19 +53,15 @@ pipeline {
             // Roll all conda packages forward beyond their pinned versions
             when { expression { return params.UPDATE_ALL } }
             steps {
-                sh "conda update --all -y -q -p ai_tools_venv"
+                sh "conda update --all -y -q -p lib_nn_venv"
             }
         }
-        stage("Build/Test") {
-            // due to the Makefile, we've combined build and test stages
+        stage("Build") {
             steps {
                 // below is how we can activate the tools
                 sh """pushd /XMOS/tools/${params.TOOLS_VERSION}/XMOS/xTIMEcomposer/${params.TOOLS_VERSION} && . SetEnv && popd &&
-                      . activate ./ai_tools_venv &&
-                      make ci"""
-                // Any call to pytest can be given the "--junitxml SOMETHING_junit.xml" option
-                // This step collects these files for display in Jenkins UI
-                junit "**/*_junit.xml"
+                      . activate ./lib_nn_venv &&
+                      cd test/unit_test && make all"""
             }
         }
     }

environment.yml

@@ -0,0 +1,16 @@
+channels:
+  - mvdbeek
+  - bioconda
+  - conda-forge
+  - anaconda
+  - defaults
+dependencies:
+  - cmake=3.14.0
+  - make=4.2.1
+  - nbval=0.9.6
+  - ncurses=6.1
+  - python=3.6.8
+  - pytest=5.2.0
+  - pytest-forked=1.1.3
+  - pytest-xdist=1.30.0
+  - Sphinx==3.3.1