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Update dependencies #798

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merged 34 commits into from
Jan 23, 2025
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f4a8917
Bump jquery-ui from 1.13.1 to 1.13.2
dependabot[bot] Jul 18, 2022
9ab3f60
Bump minimatch from 3.0.4 to 3.1.2
dependabot[bot] Nov 9, 2022
fe26bbb
Bump moment from 2.29.2 to 2.29.4
dependabot[bot] Nov 22, 2022
bb873a9
Bump decode-uri-component from 0.2.0 to 0.2.2
dependabot[bot] Dec 6, 2022
7ab969a
Bump json5 from 2.2.1 to 2.2.3
dependabot[bot] Jan 8, 2023
9ad64d8
Update python packages and poetry.lock
mauch Jan 15, 2025
e431e59
Update javascript dependencies and regnerate lock file.
mauch Jan 15, 2025
234cdfc
Merge remote-tracking branch 'origin/dependabot/npm_and_yarn/decode-u…
mauch Jan 15, 2025
bf69131
Merge remote-tracking branch 'origin/dependabot/npm_and_yarn/json5-2.…
mauch Jan 15, 2025
2fcb0d7
Merge remote-tracking branch 'origin/dependabot/npm_and_yarn/moment-2…
mauch Jan 15, 2025
2c7f001
Merge remote-tracking branch 'origin/dependabot/npm_and_yarn/minimatc…
mauch Jan 15, 2025
f173155
Merge remote-tracking branch 'origin/dependabot/npm_and_yarn/jquery-u…
mauch Jan 15, 2025
075baca
Merge remote-tracking branch 'origin/dependabot/npm_and_yarn/jquery-u…
mauch Jan 15, 2025
8bb4979
Merge branch 'update-deps' of https://github.com/askap-vast/vast-pipe…
mauch Jan 15, 2025
24f6804
Fix broken merge
mauch Jan 15, 2025
5dabae0
Update some dependencies to get rid of deprecation warnings.
mauch Jan 17, 2025
a17e7ee
Fix deprecations due to numpy and pandas upgrade
mauch Jan 17, 2025
96782e9
Run npm audit fix.
mauch Jan 17, 2025
a06bffe
Get tests to pass.
mauch Jan 17, 2025
e147fc5
Update poetry.dev-dependencies to silence deprecation warning.
mauch Jan 20, 2025
6eafc4a
Update Dask configuration.
mauch Jan 20, 2025
2c340e3
Update test-suite in workflows to deal with depracations and newer de…
mauch Jan 20, 2025
a532613
Update version to 2.0-dev
mauch Jan 21, 2025
15746d1
Upgrade Django to 5.1
mauch Jan 21, 2025
aba114b
django-q -> django-q2
mauch Jan 21, 2025
643ca92
Update bokeh to 3.6.2 and ensure versions match in pyproject.toml and…
mauch Jan 22, 2025
270f3aa
Fix eta-v plots after bokeh upgrade and fix broken TNS query on eta-v…
mauch Jan 22, 2025
0359ce3
Remove unused `bokeh.layouts.Spacer` import.
mauch Jan 22, 2025
d7f8c3b
Update package.json
mauch Jan 22, 2025
14f57a8
Update pyproject.toml
mauch Jan 22, 2025
fb24d40
Update pyproject.toml
mauch Jan 22, 2025
16e98d0
Update vast_pipeline/_version.py
mauch Jan 22, 2025
86778db
Update poetry.lock.
mauch Jan 22, 2025
995e467
Update CHANGELOG.md
mauch Jan 22, 2025
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10 changes: 5 additions & 5 deletions .github/workflows/test-suite.yml
Original file line number Diff line number Diff line change
Expand Up @@ -8,11 +8,11 @@ env:

jobs:
test:
runs-on: ubuntu-20.04
runs-on: ubuntu-22.04
strategy:
fail-fast: false
matrix:
python_version: ["3.8.12", "3.9.10", "3.10"]
python_version: ["3.11", "3.12"]

steps:
- uses: actions/checkout@v2
Expand All @@ -37,12 +37,12 @@ jobs:

- uses: snok/install-poetry@v1
with:
version: 1.5.1
version: 2.0.1
virtualenvs-create: true
virtualenvs-in-project: true
- name: cache deps
id: cache-deps
uses: actions/cache@v2
uses: actions/cache@v4
with:
path: .venv
key: pydeps-${{ hashFiles('**/poetry.lock') }}
Expand All @@ -54,7 +54,7 @@ jobs:

- uses: actions/setup-node@v4
with:
node-version: "12"
node-version: "18"

- name: Set up frontend assets
run: |
Expand Down
3 changes: 2 additions & 1 deletion CHANGELOG.md
Original file line number Diff line number Diff line change
Expand Up @@ -7,12 +7,12 @@ The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/),
## [Unreleased](https://github.com/askap-vast/vast-pipeline/compare/v1.1.0...HEAD)

#### Added

- Added option to disable forced photometry clustering [#788](https://github.com/askap-vast/vast-pipeline/pull/788)
- Added additional logging to forced extraction step [#788](https://github.com/askap-vast/vast-pipeline/pull/788)

#### Changed

- V2: Update dependencies to fix dependabot warnings and prepare for Dask distributed implementation.
- Upgrade forced_phot dependency to v0.2 and force `use_numba=True` [#788](https://github.com/askap-vast/vast-pipeline/pull/788)
- Remove bad forced photometry fits immediately after calculation, rather than after they've all been compiled into a single dataframe [#788](https://github.com/askap-vast/vast-pipeline/pull/788)
- Optimise associations upload by dropping unnecessary columns prior to a large dataframe merge [#787](https://github.com/askap-vast/vast-pipeline/pull/787)
Expand All @@ -30,6 +30,7 @@ The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/),

#### List of PRs

- [#798](https://github.com/askap-vast/vast-pipeline/pull/798): dep: V2: Update dependencies to deal with dependabot reccomendations and to prepare for V2 upgrades.
- [#795](https://github.com/askap-vast/vast-pipeline/pull/795): fix: Fixed outdated jupyterhub link on pipeline website
- [#788](https://github.com/askap-vast/vast-pipeline/pull/788): feat, fix: Speed up forced fitting code by using numba-fied forced_phot code and reordering some calculations
- [#787](https://github.com/askap-vast/vast-pipeline/pull/787): fix: Optimise associations merge and minor variable name updates
Expand Down
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