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Update Docker to use focal and ignore sbmlmath Python req
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bgyori committed Oct 19, 2023
1 parent 4578654 commit c3602cb
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8 changes: 4 additions & 4 deletions docker/Dockerfile
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
FROM ubuntu:22.04
FROM ubuntu:focal

WORKDIR /sw

Expand All @@ -14,8 +14,8 @@ RUN apt-get update && \
apt-get purge -y python3-blinker && \
ln -s /usr/bin/python3 /usr/bin/python

ARG version=2023-07-07
ARG domain=epi
ARG version=2023-10-19
ARG domain=climate
# This latter is used in the code
ENV MIRA_DOMAIN=${domain}

Expand All @@ -34,7 +34,7 @@ RUN python -m pip install --upgrade pip && \
python -m pip install bootstrap_flask && \
python -m pip install --no-dependencies pint && \
python -m pip install --no-dependencies "lxml>=4.6.4" && \
python -m pip install --no-dependencies sbmlmath
python -m pip install --no-dependencies --ignore-requires-python sbmlmath

# Copy the example json for reconstructing the ode semantics
RUN wget -O /sw/sir_flux_span.json https://raw.githubusercontent.com/indralab/mira/main/tests/sir_flux_span.json
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